| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6421 |
|---|
| Symbol | |
|---|
| ID | 4315325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 1047367 |
|---|
| End bp | 1048263 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638154265 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_778299 |
|---|
| Protein GI | 115361162 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGT CTGACTACCC GACCGTCGCC GTTGTCGGTC CGGGCGCAAT CGGAACGACC
GTCGCCGCGG CCCTTCATGA CGCTGGCCGC ACGCCGGTGA TCTGCGGCCG CTCGGCGCAC
GAGCGGTTGA TGCTGCGCTT CGATGGCGGC GAGATCGTCG TGCCCGGGCC CGTGCGGACC
GATCCGCAAG CGGTCAACGA AAGATTCGAT CTCGTGTTCG TTGCGGTCAA GTCGACGCAA
GTGGCGAGCG CGGCACCCTG GATCGCGGCG CTATGCGATG CGAAGACGGT GGTCTGCGTG
CTGCAAAATG GCGTCGAGCA AACAGCCGCC TTCGCGCCAT ATGCGGCCGG CGCGGCGATC
GTGCCATCGG TCGTCTGGTT TCCGGCGCAA CGCGAATCGG ATGCGTCGGT GTGGCTGCGC
GGCAAACCGC GGCTCACTGT GCCCGATACG CCGGCGAGCA ATGTGGTGGT CTCGGCGTTG
CACGGCACGC GATGCCCGGT CGAGGTGGCG GACGATTTCA TCTCGCTCGC ATGGCGAAAG
CTTTTGCAGA ACGCGGTGGC TGGCCTCATG GTGCTGACTG GCCGCCGCGC CGGCATGTTC
TCGCGAAGCG ACATCACCGA ACTGTCGCTC GCCTACCTGC GGGAATGTCT CGAAGTCGCA
CGTGCGGAGG GCGCGAAGCT GGGCGATGAA GTGCCGCGGG AGATCGTCGA CGGATTCCAT
CGCTTCCCGC CCGATTTGGG GACGTCCATT CTTGCCGATC GGCAGGGTAA CCGCCCCCTC
GAATGGGACT GCCGGAATGG CGTGGTGCAG CGATGCGGAC GAGCTCACGG AATTCCGACG
CCGATCAGCG ATCTGGTCGT GCCGCTTCTC GCGGCCGCCA GCGATGGTCC GGGCTAG
|
|---|
| Protein sequence | MTKSDYPTVA VVGPGAIGTT VAAALHDAGR TPVICGRSAH ERLMLRFDGG EIVVPGPVRT
DPQAVNERFD LVFVAVKSTQ VASAAPWIAA LCDAKTVVCV LQNGVEQTAA FAPYAAGAAI
VPSVVWFPAQ RESDASVWLR GKPRLTVPDT PASNVVVSAL HGTRCPVEVA DDFISLAWRK
LLQNAVAGLM VLTGRRAGMF SRSDITELSL AYLRECLEVA RAEGAKLGDE VPREIVDGFH
RFPPDLGTSI LADRQGNRPL EWDCRNGVVQ RCGRAHGIPT PISDLVVPLL AAASDGPG
|
|---|
| |