| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6410 |
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| Symbol | |
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| ID | 4315314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1035328 |
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| End bp | 1036452 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638154254 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_778288 |
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| Protein GI | 115361151 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.569805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.545027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC AAAGTAAGAG CGCAGAGATT GCGATTCACC TGTCCGCAAC GGCTCGCTCC
GCAGACGAGC GGAAGAGATT GATGGAGTCG AAGTTCAACT TCGGCGAGCT CTTTACCGAC
CATATGCTCA CAGCACAGTA CTCGCCCACG GAAGGTTGGC ACGATTTCCG TATTGCCGCC
GTGGCGCCTT TCGAAATGCA TCCTGCGTCC ACGGTTCTCC ACTACGGCCA GGCAATATTC
GAGGGGATGA AGGCCTACGC GACCCCCGAC GGTGGCGTCG CACTGTTTCG TCCGGAAATG
AACGCCCGTC GATTCAGGGA AAGTGCGGAA CGCATGGCCA TGCCTCCGGT TCCGGAAGAG
ATGTTTGTGG CGTCGCTCAA CGCACTTGTC CAGATTGAAC GAACGTGGGT GCCCGATGCC
ATCGGCGCGG CGCTGTACTT GCGTCCGATG ATGTTCGCGC GGGATGTGCG GTTGCTCACG
AAACCATCGC AGTCGTACAC CTTTGCCGTG ATTGCGAGCC CGGTTTCCGA ATACTTTCGC
AATGGATTGG CGCCGATCAC GGTGTGGATA TCGGACAAAT ATATTCGCGC TGCGCGTGGG
GGCACCGGCG AAGCGAAGTG TGCCGGCAAC TACGCGGGCG GTTTCGCTGC ACAGGCCGAA
GCCGCGGCAC ATGACTGCGA GCAAGTGGTT TGGCTGGATG CATTCGATCG GCAAACCATC
GAGGAGCTGG GCGGCATGAA CGTGTATTTT GTTTTCAAAA ACGGAGATCG AACAACGCTC
GTCACGCCGA AGGCGACGGG CACGCTGTTG AAGGGAGTGA CGCGGGACAG TCTACTGACG
GTTGCCAAAG ATTGTGGATA TGAAGTGGAA GAACGGCGCA TCGATGTTCA GGAGTGGCGC
GAAGGGTGTC GTTCTGGGGC AATTACAGAA GTATTCGCAT GCGGAACGGC GGCGGTTCTT
GTGCCAGTCG GGCGCGCCAA ATCGTCCACT GGTGAAGATA TCGTGGTGAA TGGTGGCGCA
TCCGGTCCCG TCGCAGCGAA TCTGAGAGAT AGGCTTCTGG CGATTCAGCA CGGCACGGCG
CCGGATACAC ACGGCTGGCT GTCGCGGGTG ACCGGCGGCG CCTGA
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| Protein sequence | MTTQSKSAEI AIHLSATARS ADERKRLMES KFNFGELFTD HMLTAQYSPT EGWHDFRIAA
VAPFEMHPAS TVLHYGQAIF EGMKAYATPD GGVALFRPEM NARRFRESAE RMAMPPVPEE
MFVASLNALV QIERTWVPDA IGAALYLRPM MFARDVRLLT KPSQSYTFAV IASPVSEYFR
NGLAPITVWI SDKYIRAARG GTGEAKCAGN YAGGFAAQAE AAAHDCEQVV WLDAFDRQTI
EELGGMNVYF VFKNGDRTTL VTPKATGTLL KGVTRDSLLT VAKDCGYEVE ERRIDVQEWR
EGCRSGAITE VFACGTAAVL VPVGRAKSST GEDIVVNGGA SGPVAANLRD RLLAIQHGTA
PDTHGWLSRV TGGA
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