Gene Bamb_6388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6388 
Symbol 
ID4315292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1018973 
End bp1019413 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content63% 
IMG OID638154232 
Productheat shock protein Hsp20 
Protein accessionYP_778266 
Protein GI115361129 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0687951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC TCTACTTCGG AACCGACCTC TTCAGCGAGT TCGACCGCCT GCAGCAGCAG 
ATGGCGCAAC TCTTCGGCGG TTTCCCGTCC AGCATCCGCG CGAGCCGTTT CGGCACGTTC
CCGCAGGTCA ATATCGGTGC GACAGACGAT TCGATCGAGA TCGTCGCGTT CGCGCCCGGC
GTCGAGGCCG GCGCGTTCGA CGTGTCGATC GACAAGGGGC TCTTGACCAT CAGCGGCGAG
CGCAAATCGT CGCAGCCCGA CACGGACAGC GAGCGGCGCA CCTATGCGCA GGAGCGTTTT
AGCGGGATGT TCCGGCGCGT CATCGAGCTG CCCGAAACCG CTGATCCCGA CAAGGTTCAG
GCGCGCTACG AAAACGGCTG TCTGTCGATC AGCATCGGCA AGCGCGAATC GTCCAGGCCG
CGCGCCATCA CCGTCCAGTA A
 
Protein sequence
MSDLYFGTDL FSEFDRLQQQ MAQLFGGFPS SIRASRFGTF PQVNIGATDD SIEIVAFAPG 
VEAGAFDVSI DKGLLTISGE RKSSQPDTDS ERRTYAQERF SGMFRRVIEL PETADPDKVQ
ARYENGCLSI SIGKRESSRP RAITVQ