| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6386 |
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| Symbol | |
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| ID | 4315290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 1016443 |
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| End bp | 1017855 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638154230 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_778264 |
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| Protein GI | 115361127 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.157204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC TTTCCATTGG CCTGGATCAC TCCAGACGCA CGTCGCTGTC CGCGCAGATC
TACAGCGCGA TTCGCGACGC GATCGAGTCC GGCAAGCTTG CTTCGGGCGC GCGGCTGCCT
TCCTGGTCGG ATCTGGCCGC CCAGCTCGGC GTATCGCGGG GCACCGTACG CGCCGCTTAC
GAGCGTCTGA TCGACGAGCA ATTCGCGATC GGCCTCGGCG CGGCCGGCAC GCGGGTCGCA
GAGCGTCCGG CCGTGCCGAT CGCGGCCGGC TGGTCGCCGG AAGCGCCGCC CCTGCCGGAT
CTGTTCGACG CGTTCGGCGC GGCGCCTCGC GCGTTTCAAA TGGGCGTGCC GTCACAGGAC
GCGTTTCCGT TCAAGCTGTG GTCGCGCATC CTGGCGCGTG CGGCGCGCCG GGCCTCCGCG
GCGCCGGTCG GCTACCCGGA TCCGCGCGGC GAACCGGACT TGCGCCGGGA AATCGCCGCC
TATCTCGGTG TCGCCCGCGG TCTTCGTTGC AGTCCGTCGC AGGTCTTCGT CACGGCCGGT
TTCTCAGGCG CACTGAGCCT CGCGATTCGC GGGCTCGGAA TCGAAGGCCG GCAAGCATGG
ATCGAAGACC CCGGTTTTCC GCTCACGCGC ACCGCGCTCG GGCTGGCTGG CATGACCGTG
ACGGCCGTGC CGGTGGACGC CGACGGCCTC GATGTGGAGG CAGGCATCCG GCAGGCGAAG
GAAGCGGCGC TTGCCGTGGT CACGCCCGGC CAGCAGGCGC CGCTCGGGAT GACGATGTCG
CTCCCTCGGC GGATTGCACT GCTCGCCTGG GCCCGAGAAA ACAATGCGTG GATCGTCGAA
GACGACTACC TGAGCGAGCT GCAGCTGACC GGCCGGGCAG CGCCCGCGCT GGCGTCGATC
GATCAGGACG GACGGGTTCT GCACGTCGGC AGTTTCAGCA AGACGATCAG CCCGGCGCTA
CGTCTTGGCT TTCTCGTGGT GCCGCCGGAC ATGACGCGCC GCTTCGGCGA TATCGCGGCG
TGCCTCGCGC CCGCGCCGGC GGCGTGCATC CAGCACGCCG TCACCGAGTT CATGCATGAC
GGGCACTATC TTCGCCATTT GCGTCGTATG AAACGTCTCT ACGCATCGCA CCGGGAGGCG
CTGCTTAGTT GTCTGAAGGA ACTGGGCTCG AACGCGATCC AAATCCGCGC CACTGCCGGC
ATGGCGGTGG TGACGACGCT GCCCGCGGAG GTGTCGGATG TCGATATCGC GTTGCGGGCA
CGCGCGTTCG GGCTGGCTCC GGTCCCGCTT TCGCCGTGGT ACACGGGCAC GTCGCGGCCA
CAGGGCCTGC TGCTCGGCGT GACGAACCTG ACCGAACGCA CGCTCGCCAC CGACTGTTCC
CGCCTGCTGG AGCTCGTTCA CGCGGGCAAC TGA
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| Protein sequence | MTTLSIGLDH SRRTSLSAQI YSAIRDAIES GKLASGARLP SWSDLAAQLG VSRGTVRAAY
ERLIDEQFAI GLGAAGTRVA ERPAVPIAAG WSPEAPPLPD LFDAFGAAPR AFQMGVPSQD
AFPFKLWSRI LARAARRASA APVGYPDPRG EPDLRREIAA YLGVARGLRC SPSQVFVTAG
FSGALSLAIR GLGIEGRQAW IEDPGFPLTR TALGLAGMTV TAVPVDADGL DVEAGIRQAK
EAALAVVTPG QQAPLGMTMS LPRRIALLAW ARENNAWIVE DDYLSELQLT GRAAPALASI
DQDGRVLHVG SFSKTISPAL RLGFLVVPPD MTRRFGDIAA CLAPAPAACI QHAVTEFMHD
GHYLRHLRRM KRLYASHREA LLSCLKELGS NAIQIRATAG MAVVTTLPAE VSDVDIALRA
RAFGLAPVPL SPWYTGTSRP QGLLLGVTNL TERTLATDCS RLLELVHAGN
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