| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6367 |
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| Symbol | |
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| ID | 4315271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 980170 |
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| End bp | 982359 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638154211 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_778245 |
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| Protein GI | 115361108 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACGG CAACAGGTTC GGTGCGACGC GCAATCGCGA TCGCGGCCGG GGGAACGTTG
TGCGCGGCGG CCGCGGGCGG CGCGCACGCG CAGGCATCGA GCGCGGCGGC ATCTCCGTCG
GCCGATGCGG CGGCGATGCT GCCGAAGATC GATGTGACGG GCGAGGCCGG CCGCGCGTCG
CTCGGGCTCG TCGGGTTGCG TACCGCCACC GCGACGAGGA CCGACACGCC GGTCGCCGAG
ATCCCGCAGA CGACCAACGT CGTCACAGCA CAGCAGATCG AGATGACCGG CGCGACCGAC
CTGAACCAGG CGCTGCGCTA CGTGCCGGGT TTCGCGACGT TCGGGTCCGA TACGCGAACC
GACTGGTATG CGGCGCTGCG CGGCTTCACG CCGACGCTGT ATGTCGACGG CGTGGCGGCG
CCGAACACGG CGGTCATCGC GAACTGGCGC GTCGATCCTT ACACGATCGA CTCGATCGCC
GTGCTGCGCG GGCCGACGTC GGTGCTGTAC GGCGCGGGCG AGCCGGGCGC GATCGTCGAT
GCACATACGA AACTTGCCGA CGGCGAGCGC GTGCGCGAAG CCGGCGTGCA GATCGGCAAC
GATGCGCGCA AGCAGACCAT GCTCGACATC GGCGACAAAC TGGATCCGGA CGGCCGATAT
GCGTACCGCT TCGTCGGCGT CGCGCGCGAC GGCAATGCGG TGACCGGCCC GAAGGCCGAC
CGGCGCGTCG CGGTGGCGCC GTCGTTCCGC TGGCGGCCGA CGGCCGACAC GTCGCTGACG
GTGTCCGCTT CGTTCCTGCA GGATCACGGC GATATTTCGT CGAACTTCCT CCCGGCGTCG
GGCACGGTCT TGCCGAATCG GAACGGGCGT CTGTCGCAGG ACATCTACAT GGGCGACCCC
ACGTTCAACG ACTACCGGAA GAAACAATGG TCGCTCGGCT ATGCGCTCGA GCATCGCGTG
AACCCGATCT GGACGCTGCA GCAGGACGTG CGCTGGTCGC GCCTGTCGCT CGACGACGCG
ACGGTGTTCG GCAACGGCTT CATGCCCGGC AGCACGACGA ACATGATGCG GTTCGCGGGC
CTGTTCCAGT TGAACTACAG CCGGCTCGAC ATCGACAACC GCGCGCAGGC GCGCTTCGCC
ACCGGCCCGC TCGAGCACAC GCTTTTGCTC GGCCTGCAGT TCGACCGGCA GACGACGACC
AACAGCGTGT GGCTCGCGCT CGCGCCGTCG CTCAACCTGT ACCACCCCGT CTATCGTCCG
GTGACGACCG CGATCTTTTC CGGCCGCACG TCGCTCGGGC ACGTCGATCA GTACACGGCG
ATGAATTCGC TCGGCGCGTA TGTGCAGGAC CAGATTCGCT GGAACCGCTG GACGCTGACG
CTCGGCGGCC GCGAAGATCG CGTGAACGCG CGCTTCGACG ACCGCGCGGC CCGCATCGGC
ACGCAGCAGG ACGTCAGTGC GTTTTCAGGT CGCGTCGGGC TCACCTATCA GGGCGATGCG
GGATTGTCGC CTTACGTGAG CTACTCGACG TCGTTCGATC CGGTGATCGG CGTGCGGATG
TACGGCGGCG GCCTGCCGAA ACCGACGCGC GGCAAGCAGA CCGAAGCCGG GCTGCGCTGG
CAGCCGGCCG GCCGGAACCT GATGCTCACC GCGGCCGTTT ATCGGATCGA CCAGACCAAC
GTCGTGACGC CGACGCCGAC GAATCTCGAC CCCACCGGCA CGTCGTCCGT GCAGACCGGC
AAGGTGCGCT CGCGCGGTAT CGAACTGAGC GCGGTCGGGA ACGTGACGCG CGAGCTGTCG
ATCGTCGCGT CGTACGTCTA TCAGGACGTC AAGAACGTGC AGGCGAACGA TGCATCGCTG
AACAATTGGC CGGTGTCCGT GCCGCTGCCG CGGCAGATGG CGTCGCTGTG GACGGACTGG
ACCTGGCACA CCGGCGCGCT GTCGGGCCTC GGCGTCGGCG CCGGCATGCG CTACCAGAGT
GCGTCGGCCG GTGCGCCCGA CAATTCGCTG ACGGTGCCGA GCGCCACGCT GTACGATCTC
GCGATGCACT ACGAGCTGCG TCACTGGCGA TTCGCGCTGA ATGTCGCGAA TGTGTTCGAC
CGCCGCTACG TCGGCGGCTG CCAGTCTTAC GCGGTGTGCG TGTTCGGCAA CGAGCGCACG
GTGCTGGCCA GCGCGAAATA CAACTGGTAG
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| Protein sequence | MGTATGSVRR AIAIAAGGTL CAAAAGGAHA QASSAAASPS ADAAAMLPKI DVTGEAGRAS
LGLVGLRTAT ATRTDTPVAE IPQTTNVVTA QQIEMTGATD LNQALRYVPG FATFGSDTRT
DWYAALRGFT PTLYVDGVAA PNTAVIANWR VDPYTIDSIA VLRGPTSVLY GAGEPGAIVD
AHTKLADGER VREAGVQIGN DARKQTMLDI GDKLDPDGRY AYRFVGVARD GNAVTGPKAD
RRVAVAPSFR WRPTADTSLT VSASFLQDHG DISSNFLPAS GTVLPNRNGR LSQDIYMGDP
TFNDYRKKQW SLGYALEHRV NPIWTLQQDV RWSRLSLDDA TVFGNGFMPG STTNMMRFAG
LFQLNYSRLD IDNRAQARFA TGPLEHTLLL GLQFDRQTTT NSVWLALAPS LNLYHPVYRP
VTTAIFSGRT SLGHVDQYTA MNSLGAYVQD QIRWNRWTLT LGGREDRVNA RFDDRAARIG
TQQDVSAFSG RVGLTYQGDA GLSPYVSYST SFDPVIGVRM YGGGLPKPTR GKQTEAGLRW
QPAGRNLMLT AAVYRIDQTN VVTPTPTNLD PTGTSSVQTG KVRSRGIELS AVGNVTRELS
IVASYVYQDV KNVQANDASL NNWPVSVPLP RQMASLWTDW TWHTGALSGL GVGAGMRYQS
ASAGAPDNSL TVPSATLYDL AMHYELRHWR FALNVANVFD RRYVGGCQSY AVCVFGNERT
VLASAKYNW
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