| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6363 |
|---|
| Symbol | |
|---|
| ID | 4315267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 973446 |
|---|
| End bp | 974915 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638154207 |
|---|
| Product | betaine-aldehyde dehydrogenase |
|---|
| Protein accession | YP_778241 |
|---|
| Protein GI | 115361104 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.234314 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAC TCGTCAATTC ACCGGTTCGC CACCTGAAGG AAGCCGGCAG GCTGGATCGC
TTCTTCATCG ACGGCGACTG GGTGCTACCC GACGGCGGCG ACCGGTTCGC GGTCGTCTGC
CCGTCCACCG AAGACACGCT GTGCGACATC CCGCTCGGCA GCGCACGCGA TGCCGACCGC
GCGGTGCAGG CCGCGCGCAA CGCGTTCGAA CGCTGGGCCG CGACCTCGCC GCAAGAACGC
GCCGCGCTGC TCGACCGCGT GCATGCGTTG ATGCTGGAGC GCGCGGAATC GTTCGCCATG
GCGCTCGCGC TCGAAATGGG CGCGCCGATC GGCTATGCAC GCGGCGCCCA TGTGCCGCTC
GCAGCCGAAC ATATCCGGGT CGCGCGCGAC AATCTGGCCC GCTACCCGTT CGTCTCGCGG
CGCGGGACGA CCGCGGTCGT ACGCGAGCCG ATCGGCGTAT GCGCGTTGAT CACGCCGTGG
AACTGGCCGA TCTATCAGAT CACCGCGAAG GTCGGCCCGG CGCTCGCCGC AGGCTGCACG
GTGGTGCTGA AACCCAGCGA GCTGTCGCCG CTCAGCGCGC TGCTGTTCGC GGAAGTGATC
GCCGATGCGG GCGTGCCCGC GGGCGTGTTC AACCTGGTGA GCGGCAGCGG CGAGGCGGTG
GGCGCCGCGC TTTCGTCGCA CCCCGAGGTC GACATGGTGT CGATTACCGG GTCGACGCGC
GCGGGCGTGC TCGTCGCGCA GGCGGCGGCC CCGACCGTCA AGCGCGTCGC GCAGGAGCTG
GGCGGCAAAT CGCCGAACGT CGTGTTGCCG GACGCGGACC TGCAGCAGGC CATCGCGCCG
GGCGTGGCCG CCGCGTTCCG CAACATGGGG CAATCGTGCA GCGCACCGAC CCGCATGATC
GTGCCGCGCG ACGCGCTCGG CGCGGTGGAG GAACTGGCCG TCGCAGCAGC GCAGCGGCTG
ATCGTCGGCG ATCCGTTCGA CGATGCGACG ACGCACGGGC CGCTCGCCAA TCGCGCGCAG
TTCGGTCGCG TCGCGCAGAT GATCGACGTG GGCATCGACG AACGGGCGAA GCTGATCGCC
GGCGGCCCCG GACGGCCCGC GGGATTCGAC CGCGGCTTCT ATGCGCGGCC GACGATCTTT
TCCGACGTGC GCACCGACAT GGCGATCGCG CAGCAGGAGA TCTTCGGGCC GGTCCTGGCG
ATCCTTCCTT ACGATACGGT CGACGAAGCC GTCGCGATCG CGAACGACAC CGTCTATGGG
CTCGGCGCGC ATGTGCAGGG CGCCGACAAG GAACGCGCAC GTGCGGTGGC CGCGCGCATC
CGCTCGGGGC AGGTGCATCT GAACTACCCG GCATGGGATC CGCAGGCGCC GTTCGGCGGC
TACAAGCAGT CGGGTAACGG TCGCGAGTAC GGGATCGAAG GGATGGAGGA GTATATGGAG
ATCAAGTCCG TCGTCGGCTT TTACGACTGA
|
|---|
| Protein sequence | MNSLVNSPVR HLKEAGRLDR FFIDGDWVLP DGGDRFAVVC PSTEDTLCDI PLGSARDADR
AVQAARNAFE RWAATSPQER AALLDRVHAL MLERAESFAM ALALEMGAPI GYARGAHVPL
AAEHIRVARD NLARYPFVSR RGTTAVVREP IGVCALITPW NWPIYQITAK VGPALAAGCT
VVLKPSELSP LSALLFAEVI ADAGVPAGVF NLVSGSGEAV GAALSSHPEV DMVSITGSTR
AGVLVAQAAA PTVKRVAQEL GGKSPNVVLP DADLQQAIAP GVAAAFRNMG QSCSAPTRMI
VPRDALGAVE ELAVAAAQRL IVGDPFDDAT THGPLANRAQ FGRVAQMIDV GIDERAKLIA
GGPGRPAGFD RGFYARPTIF SDVRTDMAIA QQEIFGPVLA ILPYDTVDEA VAIANDTVYG
LGAHVQGADK ERARAVAARI RSGQVHLNYP AWDPQAPFGG YKQSGNGREY GIEGMEEYME
IKSVVGFYD
|
|---|
| |