Gene Bamb_6358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6358 
Symbol 
ID4315262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp967974 
End bp969308 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content68% 
IMG OID638154202 
ProductFAD dependent oxidoreductase 
Protein accessionYP_778236 
Protein GI115361099 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCA TTGAACGGTC GCCGATCGTC GTTGCCGGCA TGGACAAGAA GGATCCAATG 
AAACTGGAAT CGTACTGGCT GGATACCCGC CCCGCGTTTC GCGCCGGCAG CGAAGGCACC
GTCGAGGGAC GCGCGGACGT GGTCGTGATC GGCGGCGGTT TCACCGGCTT GTCGGCAGCG
CTCGCGCTCG CGCAGCGCGG CGTCTCGGTG GTCGTGCTCG AAGCCGCGCA GGTCGCGGGC
GAAGCGTCCG GCCGCAACGG CGGCCAGTGT AATACGGGCG TCGCGCAGGA CTACGCGTCG
CTGGCCGCGC GCATCGGCGC CGCGCAGGCG AAGCAGTTCT ATCGCGCGTA CGAAAGCGCG
GTGAAGAGCG TCGAGACGAT CGTGACCGAA CAGGCGATCG ATTGCGATTT CCGGCGCGCC
GGCAAGCTGA AGCTCGCCGC GAAACCGCAG CATTTCGCGG GGCTTGAAAA GACCTTCAAC
GCGTTGCGGC GCGACGTCGA TCCGGACATC GAGCTGATCG ACGCGTCGCA CATCCGCGAC
GAAGTCGGCT CCGACGGTTT CTACGGTGGA CTCCTGCAGC GCAACGGCGC GCAGATGCAC
ATGGGCAAGT TCGGCGTCGG GCTCGCGCAA GCGGCCGTGC GGGCCGGCGC ACGCGTGTAC
GAGCACGCGG CCGTCACGCA GCTCGAGCGG CTCGACGGCG AGCGCCACAC GATCACCAGC
ACGCGCGGCA CGATCGTCGC CGATCGCGTG CTGGTCGCGA CCGGCGCATC GCAGCTCGGG
CCGTTCGCAT GGTTCCGGCG GCGCATCGCG CCGGTCGGCA GCTTTATCGT CGTCACCGAG
CCGTTGCCCG ACGCGCAGCT GAACCGGCTG TTCCCGCATC GGCGTGCGTA CGTGACGTCG
CGCCAGATCG GCAACTACTT CCGCGTGACG CCGGACAACC GGCTGCTGTT CGGCGGCCGT
GCGCGCTTCG CGATGTCGAG CCCGCGCTCG GACGCGAAAA GCGGCGACAT CCTGCGCGCC
GGCATGGCCG GCTATTTCCC CGAACTGGCT CACGTCCGCC TCGATTACTG CTGGGGCGGG
CTGGTCGACA TCACCGCCGA CCGGCTGCCG CGCGCGGGCC AGCACGACGG GCTCTATTAC
TCGATGGGCT ACAGCGGCCA CGGCGTGCAG ATGGCGGTGC ACATGGGCCG CGTGATGGCC
GACGTGCTGT ACGGCGCGGC CGCATCGAAT CCGTGGCGCG AGCTCGACTG GCCGGCGATG
CCCGGTCATT TCGGGCACGC GTGGTTCCTG CCGATCGTCG GCGCGTATTA CCGGATGCAG
GATTTTCTGC ACTGA
 
Protein sequence
MILIERSPIV VAGMDKKDPM KLESYWLDTR PAFRAGSEGT VEGRADVVVI GGGFTGLSAA 
LALAQRGVSV VVLEAAQVAG EASGRNGGQC NTGVAQDYAS LAARIGAAQA KQFYRAYESA
VKSVETIVTE QAIDCDFRRA GKLKLAAKPQ HFAGLEKTFN ALRRDVDPDI ELIDASHIRD
EVGSDGFYGG LLQRNGAQMH MGKFGVGLAQ AAVRAGARVY EHAAVTQLER LDGERHTITS
TRGTIVADRV LVATGASQLG PFAWFRRRIA PVGSFIVVTE PLPDAQLNRL FPHRRAYVTS
RQIGNYFRVT PDNRLLFGGR ARFAMSSPRS DAKSGDILRA GMAGYFPELA HVRLDYCWGG
LVDITADRLP RAGQHDGLYY SMGYSGHGVQ MAVHMGRVMA DVLYGAAASN PWRELDWPAM
PGHFGHAWFL PIVGAYYRMQ DFLH