| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6351 |
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| Symbol | |
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| ID | 4315255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 959301 |
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| End bp | 959969 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638154195 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_778229 |
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| Protein GI | 115361092 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGT TTGAACCGAA GTACATCACC TTCGACTGTT ACGGCACGCT GACCCATTTC
CGGATGGCCG AGACGGCGCG CGAAATCTAT GCGGATCGGT TGTCGCCGGC CACGATGGAG
GCCTTCGTGC GCGCGTTCGC CGCCTATCGG CTCGACGAGG TGCTCGGCGC GTGGAAGCCG
TACCGCGACG TCGTCGTCAA TGCGGTCCGC CGCACGTGCG CGCGGATCGG CGTGAAGTTC
GACGAGGCCG AGGCTGAGCT TTTCTATCAT GCGGTGCCGA CGTGGGGCCC GCACCCGGAC
GTGCCGGCCG GGCTGTCGCG GCTGGCGTCG AAGTACAAGC TGGTGATCCT GTCGAACGCG
ATGGATGACC AGATCATGAG CAACGTCGAC AAGCTCGGCG CGCCGTTCCA TGCGGTGTTC
ACCGCGCAGC AGGCGCAGTC GTACAAGCCG CGCATGCAGG GCTTCGAATA CATGTTCGAC
AAGCTCGGCT GCAAGCCCGA GGACGTGCTG CACGTGTCGT CGAGCCTGCG CTACGACCTG
ATGACGGCCG AGGATCTCGG CATCAAGCAC AAGGCGTTCG TGAACCGCGG TCACGAGCCG
GGCACGCCGT TCTACAACTA TTACGAAGTG TCGGACATCG GCCAGCTCGC GACGCAGCTC
GGGCTGTAA
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| Protein sequence | MIQFEPKYIT FDCYGTLTHF RMAETAREIY ADRLSPATME AFVRAFAAYR LDEVLGAWKP
YRDVVVNAVR RTCARIGVKF DEAEAELFYH AVPTWGPHPD VPAGLSRLAS KYKLVILSNA
MDDQIMSNVD KLGAPFHAVF TAQQAQSYKP RMQGFEYMFD KLGCKPEDVL HVSSSLRYDL
MTAEDLGIKH KAFVNRGHEP GTPFYNYYEV SDIGQLATQL GL
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