| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6348 |
|---|
| Symbol | |
|---|
| ID | 4315252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 955460 |
|---|
| End bp | 956860 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638154192 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_778226 |
|---|
| Protein GI | 115361089 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAG CCGCGCTGAT CGAAGCCGAT CGTCAACACC TGATCCACCC CGTCGTCAAC
TATCGCGCGC ACGAGGCGCG CGGCGTCACC GTGCTCGAAT CCGCCGACGG CGTGTTCCTG
CGCGACGGCG ACGGCCATAC ATTGCTCGAT GCGTTCTCGG GCCTGTGGTG CGTGAACGTC
GGCTACGGCC GCGACAGCAT CGTGAAGGCC GCCGCCGAAC AGATGTCGAA GCTGCCCTAC
GCGACCGGCT ATTTCCATTT CGGCTCGCAG CCCGCGATCG AGCTCGCCGA ACGGCTCGCG
GCGCTCGCAC CGCCGTCGCT GAACCGCGTG TACTTCACGC TCGGCGGCTC GGATGCGGTC
GATTCCGCGG TGCGCTTCAT CACGCATTAT TTCAACGCGA CCGGCCGCCC GTCGAAGAAG
CAGATGATCG CGCTCGAGCG CGGCTATCAC GGTTCGTCGT CGATCGGCGC GGGGCTGACC
GCGCTGCCCG CGTTCCACCG CCATTTCGAC CTGCCGCGCG CTGACCAGCA CCATATCCCG
TCGCCCTACC CGTATCGCCA TCCGCTCGGC GACGATCCGC AGGCGCTGAT CGCCGCGTCG
GTCGCCGCAC TCGAAGCGAA GGTCGCGGAG CTCGGCGCGG ACAACGTCGC CGCGTTCTTC
TGCGAACCCG TGCAAGGCTC CGGCGGCGTG ATCGTGCCGC CGCCCGGCTG GCTGAAGGCG
ATGCGCGACG CCTGCCGGCG CCTCGGCATC CTGTTCGTCG CCGACGAGGT GATCACCGGC
TTCGGCCGCA CGGGCCCGCT GTTCGCGTGC GAGGCCGAGC AGGTCGATCC GGACCTGATG
ACCGTCGCGA AGGGCTTGAC CGCCGGCTAT GCGCCGATGG GCGCGGTGCT GATGTCCGAC
GAAATCTACG AAGGCCTCGC GGGCAGCCGC GCGGAGTCGG CCGTGGTCGG TCATGGGCAT
ACGTATTCCG CGCACCCGGT GAGCGCGGCG ATCGGCCTCG AAGTGCTGAA GCTCTATCAC
GAAGGCGGGC TGCTCGCGAA CGGCCAGGCG ATGGCGCCGC GCTTCGCGGC GGGGCTCGAT
GCGCTGCGCG CGCATCCGCT CGTCGGCGAC GCGCGCTCGG TCGGCCTGCT CGGCGCGCTC
GAACTGGTGT CCGACAAGGC GCGCAAGACG CGCTTCGACC CGGCGCTGAA CGTGCCCGAC
CGGATCGCGG CGGCCGCGTA CGCGAACGGC GTGGTGTTTC GCGCATTCGG CGACGGCGTG
CTCGGCTTCG CGCCGGCGCT GAGCTTCACG GCGGGCGAGT TCGACCTGCT GTTCGAACGC
GTGCGCAAGA CGCTCGACGA CGTGCTGGCC GACGCGGGCG TGCAGCGCGC GCTCGAGGCC
GCGCACGCGC AGCCGGCCTG A
|
|---|
| Protein sequence | MNQAALIEAD RQHLIHPVVN YRAHEARGVT VLESADGVFL RDGDGHTLLD AFSGLWCVNV
GYGRDSIVKA AAEQMSKLPY ATGYFHFGSQ PAIELAERLA ALAPPSLNRV YFTLGGSDAV
DSAVRFITHY FNATGRPSKK QMIALERGYH GSSSIGAGLT ALPAFHRHFD LPRADQHHIP
SPYPYRHPLG DDPQALIAAS VAALEAKVAE LGADNVAAFF CEPVQGSGGV IVPPPGWLKA
MRDACRRLGI LFVADEVITG FGRTGPLFAC EAEQVDPDLM TVAKGLTAGY APMGAVLMSD
EIYEGLAGSR AESAVVGHGH TYSAHPVSAA IGLEVLKLYH EGGLLANGQA MAPRFAAGLD
ALRAHPLVGD ARSVGLLGAL ELVSDKARKT RFDPALNVPD RIAAAAYANG VVFRAFGDGV
LGFAPALSFT AGEFDLLFER VRKTLDDVLA DAGVQRALEA AHAQPA
|
|---|
| |