Gene Bamb_6340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6340 
Symbol 
ID4315244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp946138 
End bp947001 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID638154184 
ProductNmrA family protein 
Protein accessionYP_778218 
Protein GI115361081 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC TCGTTACCGG CGCCACCGGC CGTGTCGGCC GCCAGGTCGT CCATCAACTC 
GTCCAGCGCG GCGCCGACGT GCGCGTGCTG GTGCGCGATC CGTCCAAAGC CGATTTTCCG
GCGGCGGTGA GCGTCGTTCA GGGCGACATG CTCGATATCG ACTCGCTGCG CACGGCCTTC
TCCGGCGTGC GCACGCTGTT CCTGCTCAAC GGCGTGGCGG GCGACGAATT CACGCATGCG
CTGATCGCGC TGAATCTTGC ACGCGAGGCG GGTATCGAGC GCGTCGTCTA TCTGTCGGTC
TTCGATGCCG ACCGCTTCGT CAACGTGCCG CACTTCGCGG TGAAATCCGG CGCCGAGCGG
ATGATCGATC AGATGGGATT CAGCGCGACG ATCCTGCGCC CTGCATATTT CATGGACAAC
GAACTAATGA TCAAGGACAC AATCGTCGAT CACGGTGTCT ACCCGATTCC GATCGGCAGC
AAGGGCGTCG CGATGGTCGA CGTGCGCGAC ATCGCGGAAG TCGCGGCGAT CGAGCTGATC
CGCCTCAACG ACGCGCCCGG CAAGCTGCCG GTCGAGACCA TCAACCTGGT CGGGCCCGAC
ACGCTGACGG GCCCGGAGCT GGCGTCGATC TGGTCGGAGC TGCTTGGCCG CCCGGTAGCC
TACGGCGGCG ACGATCCCAC GGCGTTCGAA AGCAATTTCG CGAATTTCAT GCCGAAATGG
ATGGCCTACG AGATGCGCCT GATGGCCGAA CGCTACGTCA GCGACGGGAT GGTGCCTCAG
GCCGGCGATG TCGAGCGGCT GACCGCGATC CTCGGCCGCC CGCTGCACGC GTACCGCGAC
TTCGCGGCAG CGCTGGTCCG CTGA
 
Protein sequence
MTILVTGATG RVGRQVVHQL VQRGADVRVL VRDPSKADFP AAVSVVQGDM LDIDSLRTAF 
SGVRTLFLLN GVAGDEFTHA LIALNLAREA GIERVVYLSV FDADRFVNVP HFAVKSGAER
MIDQMGFSAT ILRPAYFMDN ELMIKDTIVD HGVYPIPIGS KGVAMVDVRD IAEVAAIELI
RLNDAPGKLP VETINLVGPD TLTGPELASI WSELLGRPVA YGGDDPTAFE SNFANFMPKW
MAYEMRLMAE RYVSDGMVPQ AGDVERLTAI LGRPLHAYRD FAAALVR