Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6340 |
Symbol | |
ID | 4315244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 946138 |
End bp | 947001 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638154184 |
Product | NmrA family protein |
Protein accession | YP_778218 |
Protein GI | 115361081 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTC TCGTTACCGG CGCCACCGGC CGTGTCGGCC GCCAGGTCGT CCATCAACTC GTCCAGCGCG GCGCCGACGT GCGCGTGCTG GTGCGCGATC CGTCCAAAGC CGATTTTCCG GCGGCGGTGA GCGTCGTTCA GGGCGACATG CTCGATATCG ACTCGCTGCG CACGGCCTTC TCCGGCGTGC GCACGCTGTT CCTGCTCAAC GGCGTGGCGG GCGACGAATT CACGCATGCG CTGATCGCGC TGAATCTTGC ACGCGAGGCG GGTATCGAGC GCGTCGTCTA TCTGTCGGTC TTCGATGCCG ACCGCTTCGT CAACGTGCCG CACTTCGCGG TGAAATCCGG CGCCGAGCGG ATGATCGATC AGATGGGATT CAGCGCGACG ATCCTGCGCC CTGCATATTT CATGGACAAC GAACTAATGA TCAAGGACAC AATCGTCGAT CACGGTGTCT ACCCGATTCC GATCGGCAGC AAGGGCGTCG CGATGGTCGA CGTGCGCGAC ATCGCGGAAG TCGCGGCGAT CGAGCTGATC CGCCTCAACG ACGCGCCCGG CAAGCTGCCG GTCGAGACCA TCAACCTGGT CGGGCCCGAC ACGCTGACGG GCCCGGAGCT GGCGTCGATC TGGTCGGAGC TGCTTGGCCG CCCGGTAGCC TACGGCGGCG ACGATCCCAC GGCGTTCGAA AGCAATTTCG CGAATTTCAT GCCGAAATGG ATGGCCTACG AGATGCGCCT GATGGCCGAA CGCTACGTCA GCGACGGGAT GGTGCCTCAG GCCGGCGATG TCGAGCGGCT GACCGCGATC CTCGGCCGCC CGCTGCACGC GTACCGCGAC TTCGCGGCAG CGCTGGTCCG CTGA
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Protein sequence | MTILVTGATG RVGRQVVHQL VQRGADVRVL VRDPSKADFP AAVSVVQGDM LDIDSLRTAF SGVRTLFLLN GVAGDEFTHA LIALNLAREA GIERVVYLSV FDADRFVNVP HFAVKSGAER MIDQMGFSAT ILRPAYFMDN ELMIKDTIVD HGVYPIPIGS KGVAMVDVRD IAEVAAIELI RLNDAPGKLP VETINLVGPD TLTGPELASI WSELLGRPVA YGGDDPTAFE SNFANFMPKW MAYEMRLMAE RYVSDGMVPQ AGDVERLTAI LGRPLHAYRD FAAALVR
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