| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6339 |
|---|
| Symbol | |
|---|
| ID | 4315243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 945608 |
|---|
| End bp | 946006 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638154183 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_778217 |
|---|
| Protein GI | 115361080 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTC CCGCCGCTGC GTTCGCCGAA TCGTTCGACC TCGAGGCTGC CTTCGCCGAT
GTATCCGAAT ACTGGTCGCC CAAGGTCGTC GCGCAGGTCA ACGATCAGTA TGTGAAAGTC
GCGAAGGTTC GCGGTCAGCT CGTGTGGCAC GACCATGCGC ATGAAGACGA GCTGTTCTTC
GTCGTGCGCG GGCACCTGAG GATCGAGTAT GAAGGCGGCC GCGTCGTCGA CTTGCCCGCC
GGCTCGATGC ACGTGGTGCC GCGCGGCACG CAGCATAACC CCGTCGCCGA CGACGAATGC
TGGATCGTGC TGATCGAGCC CGTGCAGACG AAGCACACCG GCGATGTCGA GTCACCGTTG
ACGCGCACGA TCGACGAGCA ACTGGGTCAG GCTCGCTGA
|
|---|
| Protein sequence | MTIPAAAFAE SFDLEAAFAD VSEYWSPKVV AQVNDQYVKV AKVRGQLVWH DHAHEDELFF
VVRGHLRIEY EGGRVVDLPA GSMHVVPRGT QHNPVADDEC WIVLIEPVQT KHTGDVESPL
TRTIDEQLGQ AR
|
|---|
| |