Gene Bamb_6338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6338 
Symbol 
ID4315242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp944665 
End bp945540 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content67% 
IMG OID638154182 
Productputative oxidoreductase 
Protein accessionYP_778216 
Protein GI115361079 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCG TCGTTCAATC CGGCACGTTT TCCCTGGCGG GCCGCCGCGT TCATCGCCTC 
GGTTATGGCG CAATGCAATT GGCCGGGACG GGCGTGTTCG GGCCGCCGAA GGATCGCGAC
GCGGCGCTCG CCGTGCTGCG CGAAGCCGTC GAAGCGGGCG TCGATCACAT CGACACCAGC
GACTTTTATG GACCACATGT GACGAACCAG CTGATTCGCG ACGCGTTGCA TCCGTATCGC
GACGATCTGC TGATCGTGAC GAAGATCGGC GCGACGCGCG GCGACGATGG TTCGTGGCTG
CCGGCGTTCT CTGCCCAGGC GCTTGCGGCC GCCGTGCACG ACAACCTGCG CAACCTGGGT
CTCGACGTGC TCGACGTCGT CAATCTGCGG ATCATGTTCG ACGTGCACGG GCCGGCCGAG
GGCTCCATCG AGGCGCCGCT GTCCGCGCTG GCTGAGCTGC AGCGGCAGGG CCTCGTGCGA
CACATCGGGC TGAGCAACGT CACGGCCGCG CAGATCGCGG AAGGCCGGCG GATCTGCGAC
ATCGCGTGCG TGCAGAATCA CTACAACCTC GCGCATCGCG ACGACGATGA ACTGATCGAT
GCGCTGGGTC GCGACGGCAT TGCCTACGTA CCGTACTTTC CGCTTGGCGG CTTCAATCCG
TTGCAGTCGT CGACGCTCGA CGCGGTCGCC GCGCGGCTCG GCGCGACGCG GATGCAGACA
GCGCTCGCGT GGCTGCTGCG CCGCGCGCCG AACATCCTGC TGATTCCGGG AACGTCGTCG
GTCGCGCATC TGCGCGAGAA TCTCGCGGCC GGTGCGCTGG TGTTGCCGGA CGATGCGGTG
CGCGAACTCG ACGGGGTCGG GGCTGCTGGC GGTTGA
 
Protein sequence
MSPVVQSGTF SLAGRRVHRL GYGAMQLAGT GVFGPPKDRD AALAVLREAV EAGVDHIDTS 
DFYGPHVTNQ LIRDALHPYR DDLLIVTKIG ATRGDDGSWL PAFSAQALAA AVHDNLRNLG
LDVLDVVNLR IMFDVHGPAE GSIEAPLSAL AELQRQGLVR HIGLSNVTAA QIAEGRRICD
IACVQNHYNL AHRDDDELID ALGRDGIAYV PYFPLGGFNP LQSSTLDAVA ARLGATRMQT
ALAWLLRRAP NILLIPGTSS VAHLRENLAA GALVLPDDAV RELDGVGAAG G