| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6335 |
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| Symbol | |
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| ID | 4315239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 940889 |
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| End bp | 942448 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638154179 |
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| Product | xylose transporter ATP-binding subunit |
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| Protein accession | YP_778213 |
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| Protein GI | 115361076 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | [TIGR02633] D-xylose ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CCTTGCTGAC GATGCGCGGC ATCGTCAAGG CATTCGACGG CGTGAAGGCG
CTCGACGGAA TCGACCTGAC CGTGCGTCCG GGCGAGTGCG TCGGCCTGTG CGGCGAGAAC
GGCGCCGGCA AGTCGACGCT GATGAAGGTG CTGTCGGGCG TCTACCCGCA CGGCACGTGG
GACGGCGAGA TCCGCTGGGA AGGCGCGCCG CTCGTCGCGT CCGGCGTGCG CGACACCGAG
CGCGCGGGCA TCGTGATCAT TCATCAGGAG CTGATGCTCG TGCCCGAGCT GTCGGTGGCC
GAGAACATTT TTCTCGGCAA CGAGATCACG CTGCCCGGCG GGCGCATGCA CTATGCGGAG
ATGGTGCGGC GTTCGGAAGC GCTGCTGCGC GACCTGCGGA TCGACGCGAT CAACGTCGCG
CAGCCGGTGA TGAACTACGG CGGCGGCCAC CAGCAGCTGA TCGAGATCGC GAAGGCGCTG
AACAAGCGCG CGAAGCTGCT GATCCTCGAC GAGCCGTCGT CGTCGCTGAG CGCCGCCGAG
ACGCGCATCC TGCTCGACAT CGTGCGCGAC CTGAAGCGTC GCGGTGTCGC TTGCGTGTAC
ATCTCGCACA AGCTCGACGA AGTCGACGCG GTATGCGACA CCGTGACCGT GATCCGCGAC
GGCCGCCATG TCGCGACCGA GCCGATGAGT ACGCTGACCA CCGACCGGAT CATCGCGATG
ATGGTCGGCC GCGAGATTCG CAACCTGTAT CCGCGCGAGC CGCACGAGAT CGGCGACGTC
GTGCTGGAGG CACGCAACGT GACCTGTCAC GACGTGGCCA ACCCGCGCCG CAAGCGCGTC
GACGACGTAT CGTTCGCCGT GCGGCGCGGC GAGATCCTCG GCGTCGCCGG GCTCGTCGGC
GCGGGGCGCA CCGAGCTGAT GCAGGCGATC TTCGGCGCGT ATCCGGGCGC GAGCACGGCG
AGCATTCGGA TGAACGGCCG GCCGCTCGCG ATCCGCGCGC CGGCCGATGC GATCCGCGCG
GGCATCGCGA TGGTGCCGGA GGACCGCAAG CGCCACGGGA TCGTGCCGCA GCTCGGCGTG
GGCCACAACA TCACGCTGTC GGTGCTGCGC CGTTTCGCGA CGCGCGGACG GATCGACGCG
GCCGCCGAGC TCGATGCGAT TCGCACGGAG ATGCAGCGGC TGTCGGTGCG CGCCGCGCAT
CCGTTCCTGC CGATCGCGAG CCTGTCCGGC GGCAACCAGC AGAAGGCGGT GCTCGCCAGG
ATGCTGCTGG CCGACCCGCA GGTGCTGATC CTCGACGAAC CGACCCGCGG CGTCGACGTC
GGCGCGAAGG CGGAGATCTA TCGGCTGATC TTTGCGCTCG CGAAACGCGG CGTCGCGCTG
ATCGTCGTGT CGTCGGAGTT GCCGGAAGTG CTCGGGCTGG CCGATCGCGT GCTCGTGATC
GGCGAGGGCG AGCTGCGCGG CGATTTCGTG AACGACGGCC TCACGCAGGA ACAGATCCTC
GGCGCCGCGC TGACGCCCGC GCGGCGTCCG GCCGAACCCA TTGCAGCGAG TAACCCATGA
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| Protein sequence | MTEPLLTMRG IVKAFDGVKA LDGIDLTVRP GECVGLCGEN GAGKSTLMKV LSGVYPHGTW
DGEIRWEGAP LVASGVRDTE RAGIVIIHQE LMLVPELSVA ENIFLGNEIT LPGGRMHYAE
MVRRSEALLR DLRIDAINVA QPVMNYGGGH QQLIEIAKAL NKRAKLLILD EPSSSLSAAE
TRILLDIVRD LKRRGVACVY ISHKLDEVDA VCDTVTVIRD GRHVATEPMS TLTTDRIIAM
MVGREIRNLY PREPHEIGDV VLEARNVTCH DVANPRRKRV DDVSFAVRRG EILGVAGLVG
AGRTELMQAI FGAYPGASTA SIRMNGRPLA IRAPADAIRA GIAMVPEDRK RHGIVPQLGV
GHNITLSVLR RFATRGRIDA AAELDAIRTE MQRLSVRAAH PFLPIASLSG GNQQKAVLAR
MLLADPQVLI LDEPTRGVDV GAKAEIYRLI FALAKRGVAL IVVSSELPEV LGLADRVLVI
GEGELRGDFV NDGLTQEQIL GAALTPARRP AEPIAASNP
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