Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6334 |
Symbol | |
ID | 4315238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 939789 |
End bp | 940817 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638154178 |
Product | D-xylose ABC transporter, periplasmic substrate-binding protein |
Protein accession | YP_778212 |
Protein GI | 115361075 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCG TGACGCGTCG TACCGTATTG AGTTCCCTTG CCGGCGCCGC CGCGCTGGCA ATCCTCGCGC TGGGCGCACC GCTCGCGCAC GCGAGCAAGG ACAAGCCCGA GATCGGCTTC TGCATCGACG ACCTGCGCGT CGAGCGCTGG TCGCGCGATC GCGATTATTT TGTCGCGGCC GCGACAAAGC TCGGCGCGAA GGTGTCGGTG CAGTCGGCCG ACGCCAGCGA GGCGCGGCAG ATTTCCCAGA TCGAGAACCT GATCTCGCGC GGCGTCGACG TGATCGTGAT CGTGCCGTTC AATTCGAAGA CGCTCGGCAA CGTCGTCGCC GAAGCGCGGA AGGCCGGCAT CAAGGTCGTG TCGTATGACC GTCTGATCCT CGACGCGGAT GTCGACGCGT ACATCTCGTT CGACAACGAG AAGGTCGGCG AACTGCAGGC GCAGGGCGTG TTCGACGCGA AGCCGAAGGG CAACTACTTC CTGCTCGGCG GCGCGCCGAC CGACAACAAC GCGAAGATGC TGCGCGAAGG ACAACTGAAG GTGCTGAAGC CGGCGATCGA CCGCGGCGAC ATCAAGCTCG TCGGCCAGCA ATGGGTGCCC GAGTGGAGCG CGTCGACCGC GCTGCGGATC GTCGAGGACG CGCTGACCGC GAACAACAAC AAGATCGACG CGATCGTCGC GTCGAACGAC GGCACCGCGG GCGGCGCGAT CCAGGCGCTC GCCGCGCAGC ATCTGGCCGG CAAGGTGCCG GTGTCCGGGC AGGATGCGGA TCTCGCGGCC GTCAAGCGCG TGATCGCCGG CACGCAGACG ATGACGGTCT ACAAGCCGCT GAAGCTGATC GCGAGCGAAG CCGCGAAGCT CGCGGTCGAT CTGGCGAAGG GCGCGAAGCC CGCGTTCAAC GCGCAATACG ACAACGGGAA GAAGAAGGTC GACACGGTGC TGCTGCAGCC GACGCTGCTG ACGAAGCGCA ACGTCGACGT CGTCGTGAAG GACGGCTTCT ACACCCAGGC CCAGCTGGCG AGCCAGTAA
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Protein sequence | MKSVTRRTVL SSLAGAAALA ILALGAPLAH ASKDKPEIGF CIDDLRVERW SRDRDYFVAA ATKLGAKVSV QSADASEARQ ISQIENLISR GVDVIVIVPF NSKTLGNVVA EARKAGIKVV SYDRLILDAD VDAYISFDNE KVGELQAQGV FDAKPKGNYF LLGGAPTDNN AKMLREGQLK VLKPAIDRGD IKLVGQQWVP EWSASTALRI VEDALTANNN KIDAIVASND GTAGGAIQAL AAQHLAGKVP VSGQDADLAA VKRVIAGTQT MTVYKPLKLI ASEAAKLAVD LAKGAKPAFN AQYDNGKKKV DTVLLQPTLL TKRNVDVVVK DGFYTQAQLA SQ
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