Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6332 |
Symbol | |
ID | 4315236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 936884 |
End bp | 938206 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638154176 |
Product | xylose isomerase |
Protein accession | YP_778210 |
Protein GI | 115361073 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTATT TCGAACACAT TCCCGCGATT CGTTACGAAG GTCCGCAGTC GGACAACCCG CTGGCCTACC ACCATTACGA CGCCGAGAAG CGTGTGCTCG GCAAGACGAT GGCCGAGCAT CTGCGGATTG CCGTGTGCTA CTGGCACACG TTCGTATGGC CGGGGCACGA CATCTTCGGG CAGGGCGCAT TCCAGCGGCC CTGGCAGCAA CCCGGCGACG CACTCGAGCG GGCGCGGCTG AAGGCCGATG CGGCATTCGA ATTCTTCACG AAGCTCGGTA CGCCGTTCTA TACGTTCCAT GACACGGACG TCGCGCCGGA GGGCGACAGC CTGCGCGAGT ACGCGGCCAA TTTCGCGCGG ATGGTCGACT ATCTCGGCGA GCGCCAGCAG GCGAGCGGCG TGCGGCTGCT GTGGGGGACC GCGAACCTGT TCTCGCACCC GCGCTTCGCG GCGGGCGCGG CGACGAACCC GAACCCCGAC GTGTTCGCGT GGGCCGCGAC CCAGGTGTGC CATGCGCTCG ACGCAACGCA CCGGCTCGGC GGCGAGAACT ACGTGCTGTG GGGCGGCCGC GAAGGGTACG AGACGCTGCT CAATACCGAC CTGAAGCGCG AGCGCGACCA GTTCGCGCGC TTCCTGTCGA TGGTCGTCGA GCACAAGCAC CGGATCGGCT TCAAGGGCGC GCTGCTGATC GAGCCGAAGC CGCAGGAGCC GACCAAGCAC CAGTACGACT ACGACGTCGC GACCGTGCAC GGCTTCCTCG TGCAGTACGG ACTGCAGAAC GAGATCCGCG TGAACATCGA GGCGAACCAC GCGACGCTCG CCGGTCATTC GTTCCATCAC GAGATCGCGA ATGCGTTCGC GCTCGGCGTG TTCGGCAGCG TCGACGCGAA CCGCGGCGAT CCGCAGAACG GCTGGGACAC CGACCAGTTT CCGAACAGCG TCGAGGAACT GACGCTCGCG TTCTACGAGA TCCTGCGCCA CGGCGGCTTT ACCACCGGCG GGATGAACTT CGACGCGAAG GTGCGCCGCC AGAGCGTCGA TCCGGAAGAC CTGTTCTACG GCCATGTCGG CGCGATCGAC GTGCTTGCGC TCGCGCTCGA ACGCGCGGCG GTGCTGGTCG AGAACGACCG GCTCGACGCG CTGCGCCGGC AGCGCTACGC GCAGTGGGAC GATGCGTTCG GCCAGAAGAT CCTGTCGGGC GGCTATACGC TGCAGTCGCT CGCGGACGAC GCGCTCGCGC GCGGCGTGGA CCCGCGGCAT GCGAGCGGCG CGCAGGAGCG GCTCGAGAAC ATCGTGAACC AGGCGATCTA CGGGCTGCGC TGA
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Protein sequence | MSYFEHIPAI RYEGPQSDNP LAYHHYDAEK RVLGKTMAEH LRIAVCYWHT FVWPGHDIFG QGAFQRPWQQ PGDALERARL KADAAFEFFT KLGTPFYTFH DTDVAPEGDS LREYAANFAR MVDYLGERQQ ASGVRLLWGT ANLFSHPRFA AGAATNPNPD VFAWAATQVC HALDATHRLG GENYVLWGGR EGYETLLNTD LKRERDQFAR FLSMVVEHKH RIGFKGALLI EPKPQEPTKH QYDYDVATVH GFLVQYGLQN EIRVNIEANH ATLAGHSFHH EIANAFALGV FGSVDANRGD PQNGWDTDQF PNSVEELTLA FYEILRHGGF TTGGMNFDAK VRRQSVDPED LFYGHVGAID VLALALERAA VLVENDRLDA LRRQRYAQWD DAFGQKILSG GYTLQSLADD ALARGVDPRH ASGAQERLEN IVNQAIYGLR
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