Gene Bamb_6323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6323 
Symbol 
ID4315227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp925303 
End bp926457 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content69% 
IMG OID638154167 
ProductABC transporter related 
Protein accessionYP_778201 
Protein GI115361064 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA TTTCATTGAA GGATGTCTCG AAGCGCTACG GCGACCATGC GCCGGTGCTG 
CGCGACGTCA ACCTCGAGAT CGCATCGCAC GAGTTCTGCG TGTTTCTCGG TCCGTCGGGC
TGCGGCAAAT CCACGTTGCT TCGGATGATC GCCGGGCTCG AGGACGTGAC CGAAGGCGAG
CTGCGGATCG GCGGTGCGCG CATGAACGAC ACGCCGCCTG CCGAGCGCGG CGTCGCGATG
GTGTTCCAGA GCTATGCGCT GTTTCCGCAC ATGACGGTGT TCGAGAACAT CGGTTTCGGG
CTGCGCATCG CCGGCACGCC GAAGGACGAG ATCCGCCGGC GCGTGACCGA GGCCGCGCGC
GTGCTGCAGC TCGACGCACT GCTCGATCGC AAGCCGAAGG CGCTGTCGGG CGGGCAGCGG
CAGCGCGTCG CGATCGGCCG TGCGATCGTG CGCGAGCCGC GCGTGTTCCT GTTCGACGAG
CCGCTGTCGA ATCTCGACGC GACGCTGCGC GGCCAGACGC GCGTCGAGAT CGCCCGCCTG
CACGCACGCT TCACGCAATC GAGTTCCGTC TACGTGACGC ACGACCAGAT CGAGGCGATG
ACGCTGGCCG ACCGGATCGT GCTGCTGCAC GCGGGCGACG ACGTCGCGCG CTTCGGCAGC
ATCGCGCAGG CCGGTGCGCC GCTCGAGCTG TATCACCGCC CAGCCAACCG CTTCGTCGCG
GGCTTCATCG GCTCGCCGCG GATGAACTTC TTGCCGGCGG TCGTCGAGGC GAGCGATGCG
CACGGCTGCC GGCTGCGCCT GGACGGCACC GGCGAAACGC TGACGCTGCA CGATCGTCCG
TTGCCGCGGC ACGTCGGCGG CGGCGCGCGC GTGACGCTCG GGATTCGTCC CGAGCATCTG
ACGGTCGCGG GGCTCGGCGA TGCCGACGTG CCGGCGATCG TGCGCGACGT CGCGCTCGTC
GAGCAACTGG GCGAAGCTGC ATACGTGCAT CTCGATCAGC CCGGCGGCGT GCCGCTGCTC
GCGAAACTGC CGGGCCAGGC TGCGTTGCGG CGCGGCGAGC GTCATGCGTT CAGCGTGCCG
CCGTCGTGCT GCCACCTGTT CGACGAAGCC GGCATCGCAT TGCCGGCCAT CCACGCCGAA
GCGGCATTCG CATAG
 
Protein sequence
MTAISLKDVS KRYGDHAPVL RDVNLEIASH EFCVFLGPSG CGKSTLLRMI AGLEDVTEGE 
LRIGGARMND TPPAERGVAM VFQSYALFPH MTVFENIGFG LRIAGTPKDE IRRRVTEAAR
VLQLDALLDR KPKALSGGQR QRVAIGRAIV REPRVFLFDE PLSNLDATLR GQTRVEIARL
HARFTQSSSV YVTHDQIEAM TLADRIVLLH AGDDVARFGS IAQAGAPLEL YHRPANRFVA
GFIGSPRMNF LPAVVEASDA HGCRLRLDGT GETLTLHDRP LPRHVGGGAR VTLGIRPEHL
TVAGLGDADV PAIVRDVALV EQLGEAAYVH LDQPGGVPLL AKLPGQAALR RGERHAFSVP
PSCCHLFDEA GIALPAIHAE AAFA