| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6322 |
|---|
| Symbol | |
|---|
| ID | 4315226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 924056 |
|---|
| End bp | 925069 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638154166 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_778200 |
|---|
| Protein GI | 115361063 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.382059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACCC TCGCGCAAGT CGCGCGGCGC GCGAACGTCA CCGCGGCGAC CGTCTCGAAC
GTGTTGCGCA ATCCGCAGAA GGTGAAGCCG GCGACCGTCG AACGCGTGAT GGCGGCGATC
CGCGAACTCG GCTATCGGCC GAATCTCACC GCGCGGGCGC TCGCCGAAGG CCGCACGTCG
ACGCTCGCGC TGATGCTGTC GAACATCACG AACCCGTTCT ATCCGGAGTT CGTGCTGGCC
GCCGAGCGCG AGGCGCGCAA GCGCGGCCAT TACCTGCTCG TGTCCAACAC CGACGACGAT
CCGGCGATCA CGCGCAATTA CCTCGAGCGG ATCGCGGGAA CGCTCGCGGC CGGCGCGATC
GTGATGAACA CCGATCTCGC CGAAGCCGAA CTCGCCGACA TCGCGCGTCA CGGCGCGTCG
ATCGTGCTGT GCATGTGGGA GCACGTGCAT GCATCGCGCA CGCTGCCGTG CGTGACCGTC
GATTTCGCGG CGGCGGGCGC GCTGGCGGCC GCGCATCTAT CCGGGTTGCG GCATCGCGCG
TTCGGCGCGC TCGTCGGCAA GGGCTCGGGC GGCCCGCAGT CGGTGCGGCT GCGCGGTTTC
GCCGACGAAC TCGCGGCACG CGGCCATCCG GCGGATGCGC TGACGACCGT GTCGGCGCAC
GATTCGATCG AAGGCGGCTA CGAAGCGGCG GCTGCGCTAC TGCGCGAGAA GCCCGGCATC
ACCGCATTGT TCGCGACCAA CGACCTGATG GCGATCGGCG CGATGCAGGC GGCCACCGAT
CTCGGCCTGC GCGTGCCGGC CGATCTGTCG GTGGTCGGCA TGACCGATAT CCAGCTCGCC
CACCAGTTCC GCCCTGCGTT GACGACGGTG CGGTTCCCGA CGTCGCAGAT CGCCGCGCGG
GCGATCGCGC TGACGCTCGA CATGATCGAC GGGATCGAGC CGGCCGCGGC CGTGCATACG
ATCGGTGCGC CGGAACTCGT GGTGCGGGAG TCGACGGGGG TGGCGAGGGA TTGA
|
|---|
| Protein sequence | MVTLAQVARR ANVTAATVSN VLRNPQKVKP ATVERVMAAI RELGYRPNLT ARALAEGRTS
TLALMLSNIT NPFYPEFVLA AEREARKRGH YLLVSNTDDD PAITRNYLER IAGTLAAGAI
VMNTDLAEAE LADIARHGAS IVLCMWEHVH ASRTLPCVTV DFAAAGALAA AHLSGLRHRA
FGALVGKGSG GPQSVRLRGF ADELAARGHP ADALTTVSAH DSIEGGYEAA AALLREKPGI
TALFATNDLM AIGAMQAATD LGLRVPADLS VVGMTDIQLA HQFRPALTTV RFPTSQIAAR
AIALTLDMID GIEPAAAVHT IGAPELVVRE STGVARD
|
|---|
| |