Gene Bamb_6306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6306 
Symbol 
ID4315210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp903491 
End bp904018 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content67% 
IMG OID638154150 
Productflavin reductase domain-containing protein 
Protein accessionYP_778184 
Protein GI115361047 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.836569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.357776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA CCATTTCCTG CGATCCGGTC ATTGACCCGC TGCAATTGCG CGCCGCTTTC 
GGACAGTTTC CGACCGGCGT CACCGTGATC ACCACGCGCG CGCCGGACGG GCGCAAGGTC
GGCCTCACCG CGAATTCGTT CTCGTCGCTG TCGCTCGACC CGCCGCTCGT GCTGTGGAGC
CTGCGCAAGG TGGCACCGAG CCGCCCCGAT TTCGTTGCGG CCACGCACTT CGCGATCAAC
ATCCTCGCGC ACGACCAGAT CGAGCTGTCG CGCCGTTTCG CGACGCCGAG CGCCGACAAG
TTCGCCGGCG TGCCGCACAT GGACGCCGAC GCCGGCGGCG TGCCCTGCCT CGACGGCACG
AGCGCGCGCT TCGTGTGCCG CAACGTCGGC CATTACGAAG GCGGCGACCA CCTGCTGTTC
ATCGGCCAGA TCGAGGCATT CGATACGAAC GGCCATGCGC CGCTCGTGTT CCACGCGGGC
CAGTATCGCG CGATCTCGGC GCATCCCGAT TTTTCTCACG CCGTTTGA
 
Protein sequence
MDTTISCDPV IDPLQLRAAF GQFPTGVTVI TTRAPDGRKV GLTANSFSSL SLDPPLVLWS 
LRKVAPSRPD FVAATHFAIN ILAHDQIELS RRFATPSADK FAGVPHMDAD AGGVPCLDGT
SARFVCRNVG HYEGGDHLLF IGQIEAFDTN GHAPLVFHAG QYRAISAHPD FSHAV