| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6300 |
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| Symbol | |
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| ID | 4315204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 895119 |
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| End bp | 896090 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638154144 |
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| Product | type II secretion system protein |
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| Protein accession | YP_778178 |
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| Protein GI | 115361041 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.923016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACC TGAGCGTAAT ACATACCGTG ATGCTCGCCG GCTTGTTCAT CTTCGTCGCC
GGCGGCGTGC TGGTCGCGAT GCTGCTGTTT GCGCCGCGCA ACATCGAGCG CCGGATTCAG
CAGGCGAGCG GAGCAAGTGC GGGCATCGGC GGCGGTGCGG ACGGCGACGG GCAAACGTCG
CGCTGGATCG CGAAGCTCGT CGAGCTGTCG CAACCGATTT CCCGGCTGTC GGTGCCGCAG
GAGGGCTGGG AGAATTCTCC GCTGCGGATC CGGCTGATGA ATGCCGGCTG GCGCAATCCG
AACGCGGGCG CGCTTTACTT CGCGGCGAAG ACGGTGCTCG CGTTGGTGCT GCCGGGCGCG
GCGCTGCTGG CGCTCGCCAC GACGCGGCTC GCGGAGCAGC GCATGTTGCT GTCGTTCATT
CTCGTCGCGC TCGCCGGGAT CGGCTACTAC GTGCCGAATG TGATCCTCTC GCGGCGGATC
GCGACGCGTC AGCGGGTGAT CTTCGAGGAT TTCCCGGATG CGCTCGACTT GCTGACCGTC
TGCGTCGAAG CCGGGCTCGG GCTCGATGCG GCGCTGATGC GGGTGAGCGA GGAACTGCGC
TTTCGCAGCG AAGTGGTCGC GGGCGAGCTC GACTTGCTGC TGCTCGAGAT GCGTTCCGGG
TTCACGAAGG AAACCGCGCT GCGCAATTTC GCGCTGCGCA CCGGCGTGGA GGATATCGAA
TCGTTCTGCG CGATGCTGAT CCAGGCCGAC CGCTTCGGCA CGAGCATCGC CGAATCGCTG
CGCGTGCTGT CCGACATGCT GCGCACGCGG CGGCGGATGC GCGCCGAGGA ACGCGCCGCG
AAGATCGCGC TGAAGCTGCT GTTCCCGCTG ATCTTCAACA TCTTCCCGGC ACTCATGTGC
GTGTTGCTCG GCCCGGCGAT GATTCACGTG TATCGCGTGC TGCTGCCGTC TTTCGCCAGC
ATCGGACACT GA
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| Protein sequence | MQNLSVIHTV MLAGLFIFVA GGVLVAMLLF APRNIERRIQ QASGASAGIG GGADGDGQTS
RWIAKLVELS QPISRLSVPQ EGWENSPLRI RLMNAGWRNP NAGALYFAAK TVLALVLPGA
ALLALATTRL AEQRMLLSFI LVALAGIGYY VPNVILSRRI ATRQRVIFED FPDALDLLTV
CVEAGLGLDA ALMRVSEELR FRSEVVAGEL DLLLLEMRSG FTKETALRNF ALRTGVEDIE
SFCAMLIQAD RFGTSIAESL RVLSDMLRTR RRMRAEERAA KIALKLLFPL IFNIFPALMC
VLLGPAMIHV YRVLLPSFAS IGH
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