Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6291 |
Symbol | |
ID | 4315195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 885920 |
End bp | 886765 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638154135 |
Product | Flp pilus assembly CpaB |
Protein accession | YP_778169 |
Protein GI | 115361032 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0737796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA GTCGAGCGCT CATGATGCTG ATCATCGCGA TGGTCGCGGG GCTAGCCGCG GTCGTGTTCG CATCCCGCTG GTTGATGCAT ACATCCAGCA GCTCGGTCAC GTCGGTCGCG GTCGCGACCA CCGACCTGAA CCTGGGCGAG CCGCTCGGGC CGAACCAGAT CCACATGGTG AGCTGGCCGT CGGGCAGCGT GCCGACCGGC GCGTTCGCCG ACACGAAGGA GCTCGAAGGG CGCGTCGTGC GCACGAGCCT CGCCCGCGGC GAGCCGGTGA TCGAGTCGAA GCTCGCGCCG GTCGGCACGA AGGGCGGGTT GTCCGCAGTG ATTGCCGACG GCAGCCGCGC GATCACCGTG CGCGTGAACG ACGTGGTCGG CGTCGCGGGC TTCGCGCTGC CGGGCAACTA CGTCGACGTG ATCGTCAACA CGCAGGAACA GCAGGGCAAG ACCGACGGGC AGAGCATCTC GAAGATCGTG CTCGAGCACA TCCTCGTGCT CGCCGTCGCG CAGCAGGTCA GCCGCGACGA CACCGCACCG AAGGTCGTCA ACGCGGTGAC GCTCGAAGTC ACGCCCGATC AGGCCGAACG CCTCGACCTC GCGCGCAGCG TCGGCACGCT GTCGCTCGTG CTGCGCAACC AGGTCGACCA GAAGACGCTC ACCACCGACG GCGCAACCAA GCTGACGTTG CTCGGCAAGG CCCCGGTACC CGACGCGACG CCCGCACCGG CACCCGCGCA CGTACGGACC GTGCGCGTGC ATGTCGCGTC GCACGCCGCA CCGGAAGCGC GCCGCGATTG CGTCGGTGTA CTGACCGGTG TGCACGGCAG CGTCGAATGT TTCTGA
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Protein sequence | MKNSRALMML IIAMVAGLAA VVFASRWLMH TSSSSVTSVA VATTDLNLGE PLGPNQIHMV SWPSGSVPTG AFADTKELEG RVVRTSLARG EPVIESKLAP VGTKGGLSAV IADGSRAITV RVNDVVGVAG FALPGNYVDV IVNTQEQQGK TDGQSISKIV LEHILVLAVA QQVSRDDTAP KVVNAVTLEV TPDQAERLDL ARSVGTLSLV LRNQVDQKTL TTDGATKLTL LGKAPVPDAT PAPAPAHVRT VRVHVASHAA PEARRDCVGV LTGVHGSVEC F
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