| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6289 |
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| Symbol | |
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| ID | 4315193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 883909 |
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| End bp | 884451 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638154133 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_778167 |
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| Protein GI | 115361030 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00506337 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCTGC CTGCCGCGCT GCCTTACCCG GTTCCGTTGT GCGTGACGCT GCTCGCGATC
GTCGCGGCCA GCACCGACAT CACGAGCCGA CGCATTCCGA ACCGGCTCGT CGCGCTCGGT
CTGGTCGGCG CGCTGATCGC ACAGTGCACG CTGCACGGGA TCCAGGCAGG TGCACTTGCG
TGGCTGGCGG GCGCGGCGAC CGGCTTCGGC CTGCTGCTGC CGTTCTATCT GCTGCGCGGA
ATGGCTGCGG GTGACGTGAA GCTGATGCTC GCGATCGGCG CATGGGTCGG CGCGCAGATG
ACGTTCTACA TCGTGCTGGC CACCTTTCTG GTCGGCGGGA TCGGCGCGAT CGGCTTCGCA
CTGCTGCGCG GACGCATGCG CCAGATGTGC GCGAACGTGT GGGCGCTGAT CGCGCACCGC
TCGACCGGCG CGTATGCAGG GGCAACCGAC GGCCCCGTGG AATTCGCGTC GGTTGGCGCG
TTGCCGTATG GCGTAGCAAT TGCCGCCGGC ACGCTGGGCA TGCTGTTCGT TTCGTCTGTA
TAG
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| Protein sequence | MVLPAALPYP VPLCVTLLAI VAASTDITSR RIPNRLVALG LVGALIAQCT LHGIQAGALA
WLAGAATGFG LLLPFYLLRG MAAGDVKLML AIGAWVGAQM TFYIVLATFL VGGIGAIGFA
LLRGRMRQMC ANVWALIAHR STGAYAGATD GPVEFASVGA LPYGVAIAAG TLGMLFVSSV
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