| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6287 |
|---|
| Symbol | |
|---|
| ID | 4315191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 883320 |
|---|
| End bp | 883502 |
|---|
| Gene Length | 183 bp |
|---|
| Protein Length | 60 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 638154131 |
|---|
| Product | Flp/Fap pilin component |
|---|
| Protein accession | YP_778165 |
|---|
| Protein GI | 115361028 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3847] Flp pilus assembly protein, pilin Flp |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00948182 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGT TCATCCAGAA GGTCCGCGGT TTCGTCCAAG ACGAACAAGG TGTGACGGCC
ATCGAATACG GCCTGATTGC CGCACTGATC GCAGTCGGAC TCGTTGCAGC ACTGACGGCG
GTCGGAACGG ATCTCAAGAC CGTGTTCAAC ACGATTGCAG ACGATCTCAA CGCGGCCATC
TGA
|
|---|
| Protein sequence | MFKFIQKVRG FVQDEQGVTA IEYGLIAALI AVGLVAALTA VGTDLKTVFN TIADDLNAAI
|
|---|
| |