Gene Bamb_6286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6286 
Symbol 
ID4315190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp881047 
End bp882456 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content64% 
IMG OID638154130 
Producthypothetical protein 
Protein accessionYP_778164 
Protein GI115361027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0160508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGC CAAATCGATA TTTCACGATT CAGCCCGCGG TTTGCGTCAC GCGATTTTTT 
CTCCAACAAT GCATTCACCG GACAGCGCCA TTGAATGCGA TTCGCTCCGG ATACACGACA
ACACAAAAAG GCTGCGGCAC ACCAGGCGGC CTTCACTGCA GACGGGGCAT CATGTACACA
GCCAATCGTG GAGTGCGCTA TCGCGCCAAA CGCTGTGCTC AATGGCTGAC AGCGGACCGG
ATCATTCCGT ACAGCTGCAT CATGCTGATG CTCTGCGTTG GATTCCTGAT TACCTGGGGC
GCCGTCACGA ATACCTTCAC GTCGCAAACC ACCGCCCGGC CGGGCGTCGA CTTCTCCGTC
TTCTGGACCG CATCGCAACT CGTGCTGCAA GGCCACGCCG CGGCGATCTA CGATCCGGTC
TTCTTCTCCC ATGCCGAGGT AGCGCAGTTC GGGGCCTATC TGGGTCACCA ATCGCTGCCC
TGGCTCTATC CGCCGACGAT GCTGCTGTTC GTCGCGCCGA TTGCCCTCGT GCCTTTCCTG
CCCGCGTATT TCCTCTTTTT TGCGGGCAGT CTTTTATGCT ATGCGTACGC CGTCCTGCGA
CTGTCGGGCC TGCGTGCGTA CCTGCCCGTT CCGCGCGCCG CCGCGCTCGT CGTGCTTGCC
TATTCAGGTG TGTTCGCGTC CGTCCTGTAC GGGCAGAACA GCATCCTGAC CGCCGGTATC
GCCGCGCTCG CGCTGCATTT CATCGGCCCG CGCCCGATCA TCGCGGGCGT GCTGATCGGG
CTGCTCGCCA TCAAGCCGCA GATGGCGATG GTGTTTCCAT TCGTGCTGAT CGCGGCGCGT
GCATGGCGCA CCTTCGCGGC GGCGGCGCTC ACGACCACGC TGTTCGTGGT GGCCGGCATC
GCGCTGACCG GCACCAGCTC GCTGACCGGC CTGGCCCACG CGATGTCGAT CGTGCGCGGC
ATGCATTTCA CCCTGCCTGC CTACTGGTTC GTTTCACCGA CGACGTTCGC GGCGCTGCGG
CTCGCGGGTG CATCGATTCC GATCGCGCTC GCCGCGCAAG CCGCCGTCGG ACTGCTCGCC
ATCGCAGCCG CCGTTCATGT GTGGCGCCGC ACGGCCGACA TGCGGCTGTG CGGCGCCGCG
TTGGTGGTCG CCACGCTGTT GACGACGCCC TATCTGTGGC ATTACGAACT GGCGTGGCTC
GGCATCGCGG TCTTCTGCGT GATCGCTCAC GGCCTCGAAG ACGGCTGGCT GCCGGGAGAT
CAGATCGTGA TCGTGCTCGC GTGGCTGCTG CCGATATTCG AGGTGTTCAA CCGGATCACG
AAGCTGCCGC AGATCGGCCC GATCGTGCTG CTCGCCGTCC TGTTCGTCGT CGTGCGTCGC
GCAAGCCTTG CGCCGCGGAG CGCGCAATGA
 
Protein sequence
MSPPNRYFTI QPAVCVTRFF LQQCIHRTAP LNAIRSGYTT TQKGCGTPGG LHCRRGIMYT 
ANRGVRYRAK RCAQWLTADR IIPYSCIMLM LCVGFLITWG AVTNTFTSQT TARPGVDFSV
FWTASQLVLQ GHAAAIYDPV FFSHAEVAQF GAYLGHQSLP WLYPPTMLLF VAPIALVPFL
PAYFLFFAGS LLCYAYAVLR LSGLRAYLPV PRAAALVVLA YSGVFASVLY GQNSILTAGI
AALALHFIGP RPIIAGVLIG LLAIKPQMAM VFPFVLIAAR AWRTFAAAAL TTTLFVVAGI
ALTGTSSLTG LAHAMSIVRG MHFTLPAYWF VSPTTFAALR LAGASIPIAL AAQAAVGLLA
IAAAVHVWRR TADMRLCGAA LVVATLLTTP YLWHYELAWL GIAVFCVIAH GLEDGWLPGD
QIVIVLAWLL PIFEVFNRIT KLPQIGPIVL LAVLFVVVRR ASLAPRSAQ