Gene Bamb_6282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6282 
Symbol 
ID4315186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp876723 
End bp878162 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content65% 
IMG OID638154126 
Productmajor facilitator transporter 
Protein accessionYP_778160 
Protein GI115361023 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.384913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCA TCGTCACCGC GGATTCGCGT CCGCACGATT CGCCCTTCAT CGATGTCGAC 
GCCATGCCGG GCGCAGCAAT CGCAGCGCGC ATGGATCGGC TGCCGATCAC CCGCCATCTA
TGGATGCTGG TGCTGCTGAT TTCACTGGGC GGTTTTTTCG AAGTCTACGA CCTGATCTTC
ACCGGCTATA TCGCGCCGGG CATGGCGAAG AGCGGCGTGC TGCAAACCAC CACGCACGCA
TTTTTCGGCT TCACCGGAAT CGCCGGCTTC ATCGCCGCGA CGTTCGCCGG CTTATTCGTT
GGTACGTTCG GGCTGGGCTG GATGCCCGAT CGCTACGGCC GGCGCGCGGT GTTCACGGTG
TCGCTGCTCT GGTATTCGAT CGGCTCGGTG ATCATGGCAT TTCAGACGAC CGCCGAAGGC
ATGATCCTCT GGCGCTTCAT CACGGGAATC GGTGTCGGGG TCGAGATCAT CACGATCGAC
AGCTACGTGA CGGAACTCGT CCCGCAGCAG ATGCGTGGCC GCGCGATGGC GTTCAACCAG
AGCGTGATGT TCGCGGCGGC GCCGGTCGCC GCGATCCTGT CGTACTGGCT GGTGCCGACC
ACGGTGTTCG GCATCGACGG ATGGCGCGTC GTGGTGCTCG CGGGCGCGCT CGGCGCGTTG
CTGGTGTGGT TCATCCGGCG CGGCGTGCCG GAGAGTCCGC GGTGGCTCGC GATGCACGGA
CAGGTCGCGA GGAGCGACGC GATCGTGCGG CACATCGAGG CGATCGTCGA ACGTCAGTCG
GGGCAGCCGT TGCCGCCGCC GTCGCCGATC GTCGAACAGC CGCGGCATCG ACGCGCATCG
CTCGCGGAGT TGTGGCAGCC GCCGTATCGT TCGCGCCTCG TGATGCTGAT CGTCTTCAAC
TTTTGCCAGG CGATCGGCTA TTACGGTTTC GCGAACTGGG TGCCGACGCT GCTGATCAGC
CAGGGCATCA CGGTCACGAA AAGCCTGCTC TATTCGTTCA TCATCGCGTT CGCGTTGCCG
GTCGGGCCGC TGCTGGCGAT GGCCGTCGCC GACCGGATCC AGCGCAAATA CCTGATCGTC
GGCGGCGCGC TGGTCGTGAT CGTCTGCGGG ACGGCGTTCG CGCAGGTCAG GGCCGTGGTG
CCGCTCATCC TGCTCGGCGT GTTGATCAGC TTCGCCGGCC AGATCATCTC GGTCTGCTAC
CACGCTTACC AGGCCGAGTT GTTCCCGACG GCCGTGCGGT GCCGCGCCAA TGGAATCGTG
TACTCGGCAA GCCGGGTCGG CGCGATGATG TCGGGTTTTG CGATCGCGTT CCTGCTTCGC
GATTTCGGGT TGCCCGGCGT ATTCGCCGGG ATCACGGCGT GCATGCTGGC GGTCGCGGTA
TCGATCGGAT TCTTCGGGCC GAAGACCAAC GGCCTGCGCC TCGAGGAGCT GAACCGTTGA
 
Protein sequence
MQPIVTADSR PHDSPFIDVD AMPGAAIAAR MDRLPITRHL WMLVLLISLG GFFEVYDLIF 
TGYIAPGMAK SGVLQTTTHA FFGFTGIAGF IAATFAGLFV GTFGLGWMPD RYGRRAVFTV
SLLWYSIGSV IMAFQTTAEG MILWRFITGI GVGVEIITID SYVTELVPQQ MRGRAMAFNQ
SVMFAAAPVA AILSYWLVPT TVFGIDGWRV VVLAGALGAL LVWFIRRGVP ESPRWLAMHG
QVARSDAIVR HIEAIVERQS GQPLPPPSPI VEQPRHRRAS LAELWQPPYR SRLVMLIVFN
FCQAIGYYGF ANWVPTLLIS QGITVTKSLL YSFIIAFALP VGPLLAMAVA DRIQRKYLIV
GGALVVIVCG TAFAQVRAVV PLILLGVLIS FAGQIISVCY HAYQAELFPT AVRCRANGIV
YSASRVGAMM SGFAIAFLLR DFGLPGVFAG ITACMLAVAV SIGFFGPKTN GLRLEELNR