Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6282 |
Symbol | |
ID | 4315186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 876723 |
End bp | 878162 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638154126 |
Product | major facilitator transporter |
Protein accession | YP_778160 |
Protein GI | 115361023 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.384913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCCA TCGTCACCGC GGATTCGCGT CCGCACGATT CGCCCTTCAT CGATGTCGAC GCCATGCCGG GCGCAGCAAT CGCAGCGCGC ATGGATCGGC TGCCGATCAC CCGCCATCTA TGGATGCTGG TGCTGCTGAT TTCACTGGGC GGTTTTTTCG AAGTCTACGA CCTGATCTTC ACCGGCTATA TCGCGCCGGG CATGGCGAAG AGCGGCGTGC TGCAAACCAC CACGCACGCA TTTTTCGGCT TCACCGGAAT CGCCGGCTTC ATCGCCGCGA CGTTCGCCGG CTTATTCGTT GGTACGTTCG GGCTGGGCTG GATGCCCGAT CGCTACGGCC GGCGCGCGGT GTTCACGGTG TCGCTGCTCT GGTATTCGAT CGGCTCGGTG ATCATGGCAT TTCAGACGAC CGCCGAAGGC ATGATCCTCT GGCGCTTCAT CACGGGAATC GGTGTCGGGG TCGAGATCAT CACGATCGAC AGCTACGTGA CGGAACTCGT CCCGCAGCAG ATGCGTGGCC GCGCGATGGC GTTCAACCAG AGCGTGATGT TCGCGGCGGC GCCGGTCGCC GCGATCCTGT CGTACTGGCT GGTGCCGACC ACGGTGTTCG GCATCGACGG ATGGCGCGTC GTGGTGCTCG CGGGCGCGCT CGGCGCGTTG CTGGTGTGGT TCATCCGGCG CGGCGTGCCG GAGAGTCCGC GGTGGCTCGC GATGCACGGA CAGGTCGCGA GGAGCGACGC GATCGTGCGG CACATCGAGG CGATCGTCGA ACGTCAGTCG GGGCAGCCGT TGCCGCCGCC GTCGCCGATC GTCGAACAGC CGCGGCATCG ACGCGCATCG CTCGCGGAGT TGTGGCAGCC GCCGTATCGT TCGCGCCTCG TGATGCTGAT CGTCTTCAAC TTTTGCCAGG CGATCGGCTA TTACGGTTTC GCGAACTGGG TGCCGACGCT GCTGATCAGC CAGGGCATCA CGGTCACGAA AAGCCTGCTC TATTCGTTCA TCATCGCGTT CGCGTTGCCG GTCGGGCCGC TGCTGGCGAT GGCCGTCGCC GACCGGATCC AGCGCAAATA CCTGATCGTC GGCGGCGCGC TGGTCGTGAT CGTCTGCGGG ACGGCGTTCG CGCAGGTCAG GGCCGTGGTG CCGCTCATCC TGCTCGGCGT GTTGATCAGC TTCGCCGGCC AGATCATCTC GGTCTGCTAC CACGCTTACC AGGCCGAGTT GTTCCCGACG GCCGTGCGGT GCCGCGCCAA TGGAATCGTG TACTCGGCAA GCCGGGTCGG CGCGATGATG TCGGGTTTTG CGATCGCGTT CCTGCTTCGC GATTTCGGGT TGCCCGGCGT ATTCGCCGGG ATCACGGCGT GCATGCTGGC GGTCGCGGTA TCGATCGGAT TCTTCGGGCC GAAGACCAAC GGCCTGCGCC TCGAGGAGCT GAACCGTTGA
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Protein sequence | MQPIVTADSR PHDSPFIDVD AMPGAAIAAR MDRLPITRHL WMLVLLISLG GFFEVYDLIF TGYIAPGMAK SGVLQTTTHA FFGFTGIAGF IAATFAGLFV GTFGLGWMPD RYGRRAVFTV SLLWYSIGSV IMAFQTTAEG MILWRFITGI GVGVEIITID SYVTELVPQQ MRGRAMAFNQ SVMFAAAPVA AILSYWLVPT TVFGIDGWRV VVLAGALGAL LVWFIRRGVP ESPRWLAMHG QVARSDAIVR HIEAIVERQS GQPLPPPSPI VEQPRHRRAS LAELWQPPYR SRLVMLIVFN FCQAIGYYGF ANWVPTLLIS QGITVTKSLL YSFIIAFALP VGPLLAMAVA DRIQRKYLIV GGALVVIVCG TAFAQVRAVV PLILLGVLIS FAGQIISVCY HAYQAELFPT AVRCRANGIV YSASRVGAMM SGFAIAFLLR DFGLPGVFAG ITACMLAVAV SIGFFGPKTN GLRLEELNR
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