| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6278 |
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| Symbol | |
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| ID | 4315182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 871856 |
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| End bp | 872932 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638154122 |
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| Product | poly(3-hydroxybutyrate) depolymerase-like protein |
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| Protein accession | YP_778156 |
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| Protein GI | 115361019 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGGA AAAAACCCAG CATCTGGCTC CGGCCTTTCG ACCTGTTTTC CGCCGCGACG
AGCACGCGAC CGAAACGCAA GACAGCCAAA CCGGCGGCGT CGGTCAAGCG CGCCGCCACT
GTACGGACCC CGCGTCGCAC CCGCACCCCG GCGCCGGCCG CCCATCCGTC GCCGCGCCAC
GCACCGGGCA CCTGGCTGCG TTCGTTTCAT TCCGCGCGCC CGACCGCCGG CCGCCTCGTC
AACCATCTCG CCTACGCGCT GTACCTGCCG GCCGCACCGG TGACGACCGC CGGCATGCCG
GTCGTCGTCA TGCTGCACGG CTGCAAGCAG ACCGCCGAGT CGTTCGCCGC GGGCACGCGC
ATATGCCGCG CCGCGGAGCG TGCCGGGTTT GCCGTGCTGT TCCCCGAACA GGCGAAGACC
GCGCACGCGC ATCGCTGCTG GAACTGGCAT GGCGATGCGT CGCAGTCGGA GCTTCCGGCG
GTTGCGTCGC TGATCGACGC GATCGTGCGG GAGCGCGGGT TCGACCGCGA CCGGATCTAT
CTGGCCGGCA TGTCGGCCGG CGCGGGGCTC GCCGCGCAGC TGGCGCTCGC GTATCCCGAG
CTGTTCGCGG CCGTCGGTCT GCATTCCGGT CCGGCCATCG CGCCGCCGTT GTCGACGATG
GCCGCGATGA GCCTGATGCG CCGCGGCCTG CGCGACGACC CGATACACGT GGTCGACGCA
TGCGTCGACG TGCGCGCGTA TCCGGGCATG CCCGCGCTCG TCATGCATGG CGGGCTCGAT
ACCGTCGTCG CCGAGCAGAA CGCGCTGCAA CTCGGCGTCG CGTTCGCGCG GATCAATCGG
CTCGTCGACG AACACGGTGA GCTGCGCGTC GGCGAGCGGC ATACCTACGT GCATGACGAT
GCGGATTACA CGGACTATCT GCGCGGCGGC CGGGTGATCG TCCGCGTCTG CATCGTTCGC
CGCCTCGCGC ACGCGTGGAG CGGCGGCGAT CCGCGCGAAG CGTTCCACTC CGCGACGGGG
CCGGACGCCA CCGCGATGTT CTGGAATTTC TTTCGAAGGC GGCGGCGCAA GCGGTAA
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| Protein sequence | MPRKKPSIWL RPFDLFSAAT STRPKRKTAK PAASVKRAAT VRTPRRTRTP APAAHPSPRH
APGTWLRSFH SARPTAGRLV NHLAYALYLP AAPVTTAGMP VVVMLHGCKQ TAESFAAGTR
ICRAAERAGF AVLFPEQAKT AHAHRCWNWH GDASQSELPA VASLIDAIVR ERGFDRDRIY
LAGMSAGAGL AAQLALAYPE LFAAVGLHSG PAIAPPLSTM AAMSLMRRGL RDDPIHVVDA
CVDVRAYPGM PALVMHGGLD TVVAEQNALQ LGVAFARINR LVDEHGELRV GERHTYVHDD
ADYTDYLRGG RVIVRVCIVR RLAHAWSGGD PREAFHSATG PDATAMFWNF FRRRRRKR
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