| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6277 |
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| Symbol | |
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| ID | 4315181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 870047 |
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| End bp | 871831 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638154121 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_778155 |
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| Protein GI | 115361018 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain)
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGGCA CCTACGATCC GCTGCTTGTC CTGCTGTCGC TCGTCATCGC GACGCTGGCG
TCCTATACGG CGCTCGACCT GGCCGCGTTC ATTTCGCTGC TCGACAACCC GAAGCTCAAG
CGCGCATGGC TGGGCGGCGG CGCGGCCGCG ATGGGCACCG GCATCTGGTC GATGCATTTC
GTCGGCATGC TGGCGCTGTC GCTGCCGATC CCGCTCGGCT ATGCGTTGCC GGATACCGTC
GCGTCGCTCG TCATCGCGGT GCTCGTGTCG TATTTCGCGC TGAACATCGT CACGCGTGCG
CGGTTGAGCC GCCGGCGCCT GCTCGCGGGC GGCGCGCTGA TGGGCGCCGG CATCGTCGGG
ATGCATTACA CGGGAATGGC CGCGATGCGC ATGGCGCCCG GCATTCGCTA CGATCCCGCG
CTGTTCGCGG CGTCGATCGG CATCGCGGTG ATCGCGTCGA CCGCCGCGCT CTGGATGGCG
CAGGCGCTGC GCGTGCAACA GGCGCGCCAT GCGACCGCGC TGCGCATCGG GGCGGCGCTG
ATCATGGGCG TCGCCATCAC GGGCATGCAC TACACGGCGA TGGCCGCCGC GCATTTCGCG
CCGGATGCGC GATGCGGCGC GGCGAACGGG ATCGATGGGC CGTGGCTTGC GACGACGATC
GCCCTGTTCA CGATGGCGAC GCTGATCGTC ACGCTGCTGG TGTCCCGTTT CGATGCGCGG
ACGACCTTTC TGCGCGGGAT GACGGATACG CTCGAGCGGC TGGTGCGATT GCGGACCGCG
GAACTCGAAA CGGCGTTGCG ACGCTACGAG CAGACGACCG CGATGCTGCA GCGCACCCGC
GAAAACATGG CGACCGAGAT CGACGAGCGC AAGGCGGCGC AGATCCGGCT CGAGCAGGAG
AAGGACGAAC AGCGGCGCCT GCTGCGGGCA CTCGAGGAAA CGCACGTGCA GCTGCTGCAG
TCGGAAAAAC TCGCATCGAT CGGCCAGCTC GCGGCCGGCG TTGCGCACGA GATCAACAAT
CCGGTCGGCT TCATCAGCGC GAACCTCAAC ACGCTGAAGA CGTGGGTGCG CAGCCTGCTC
GACGTGATCG CCGCGCACGA GGCCGCGCTG CCGCAGCTGG AACCCGCCCA ACGCGACGCG
CTGGCCGCGA TGGGGCGCGC CGCCGATCTG GACTACGTGC GCGACGAGAT CGCGACGCTG
ATCGACGAGT CGATCGACGG CGCGCTGCGG GTGCGGCGGA TCGTGCAGGA CCTGCGCGAT
TTCTCGCGGC CGGGCAGCGG CGAATGGTGC GTGGCCGACA TCCACGCGGG GCTCGAGAGC
ACGCTCAACG TCGTCCACAA CGAACTCAAG TACAAGGCCG ACATCGTGCG CGAGTACGGC
GACGTGCCGC CCGTCGAATG CCTGCCGTCG CAATTGAACC AGGTCTTCAT GAACCTGCTC
GTCAACGCGG CGCACGCGAT TCCCGAGCGC GGCGTGATCA CGATCCGTAC GTCGAGCGAC
GACGAACACG TGTCGATCGC GATCAGTGAC ACCGGCACCG GCATGACGCC CGACATCGTG
CGGCGGATCT TCGATCCGTT CTTCACGACG AAGCCGGTCG GGCAGGGCAC GGGGCTCGGC
TTGTCGGTGT CGCACGGCAT CGTCGAGCGC CACCGCGGCA CAATCGACGT GACGAGCGAG
CCGGGGCGCG GCACGACCTT CCGCATTCGG CTGCCAATCC GGCGCGCAGA GACGAGCGAG
AGCGTGAGCG TGAGCGAGAC GGCGGCAGTC GGGCAGCGCG CGTGA
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| Protein sequence | MHGTYDPLLV LLSLVIATLA SYTALDLAAF ISLLDNPKLK RAWLGGGAAA MGTGIWSMHF
VGMLALSLPI PLGYALPDTV ASLVIAVLVS YFALNIVTRA RLSRRRLLAG GALMGAGIVG
MHYTGMAAMR MAPGIRYDPA LFAASIGIAV IASTAALWMA QALRVQQARH ATALRIGAAL
IMGVAITGMH YTAMAAAHFA PDARCGAANG IDGPWLATTI ALFTMATLIV TLLVSRFDAR
TTFLRGMTDT LERLVRLRTA ELETALRRYE QTTAMLQRTR ENMATEIDER KAAQIRLEQE
KDEQRRLLRA LEETHVQLLQ SEKLASIGQL AAGVAHEINN PVGFISANLN TLKTWVRSLL
DVIAAHEAAL PQLEPAQRDA LAAMGRAADL DYVRDEIATL IDESIDGALR VRRIVQDLRD
FSRPGSGEWC VADIHAGLES TLNVVHNELK YKADIVREYG DVPPVECLPS QLNQVFMNLL
VNAAHAIPER GVITIRTSSD DEHVSIAISD TGTGMTPDIV RRIFDPFFTT KPVGQGTGLG
LSVSHGIVER HRGTIDVTSE PGRGTTFRIR LPIRRAETSE SVSVSETAAV GQRA
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