| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6264 |
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| Symbol | |
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| ID | 4315168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 855915 |
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| End bp | 857450 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638154108 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_778142 |
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| Protein GI | 115361005 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCT GCTGCCCCGT AATCGCGCTC GCGTTCGCGC TCAACAGGAA GCCGGTCAGC
GCGCCAACCG CTAGAATTGC GGTTTTAGCC CGGAACACGT CCATGTCTTT TGCCTCGCTC
GGCCTGATCG ATCCCTTGCT GCGTAATCTG CAGGACCTCA ATTACCAGAC CCCTACGCCG
GTGCAGGTCA AGGCGATTCC CGCTGTGCTC GGCGGCAAGG ACGTGATGGC CGGCGCGCAG
ACCGGCACGG GCAAGACTGC GGGTTTCGCG CTGCCGCTGT TGCAGCGGCT CGTGCAGCAG
GGCCCGGCGG TGTCCAGCAA TCGCGCGCGG GTTCTGGTGC TGGTGCCGAC GCGTGAGCTG
GCCGAGCAGG TGCTGCAAAG CTTCGTCGCG TACGGCAAGG GCCTCGACTT GCGATTCCTG
GCCGCCTATG GCGGCGTCAG CATCAACCCG CAGATGATGA AGTTGCGCAA AGGCGTCGAC
GTGCTCGTTG CGACGCCGGG CCGTCTGCTG GATCTCAACC GCCAGAATGC GGTGCAGTTC
GATCAGGTCG AAACGCTGGT GCTGGACGAG GCCGACCGCA TGCTCGATCT GGGCTTCGCG
CGCGAGCTCA ATGCCGTCTT TGCCGCGCTG CCGGTTCAGC GCCAGACCCT GCTGTTCTCC
GCGACGTTTA CCGACGATAT CCGTACGATG GCGGCGAGCA TTCTGCGCAG CCCGGTCAAT
ATCAGCGTCA GCCCGCCCAA TGTCACGGGG AGCAAGATCA AGCAATGGGT GGTGACGGTC
GACAAGCGCA ACAAGCCGGA CCTCTTCATG CACCTGGTGG CCGAGAACAA CTGGGATCAC
GCGCTGGTGT TCGTCAAGAC CCGCAATGGC GTGGAGTATC TGGCGGCCAT GCTGGACGAG
GCCGGCTATG CGGTCGACAC GATCCACGGC GACAAACCGC AACCGGCGCG GCTGCGTGCG
CTCGAGCGCT TCAAGACGGG CGAAGTGCAG ATGCTGGTCG CCACCGATGT GGCGGCGCGC
GGGCTGGATA TCGATGACTT GCCGCTGGTG ATCAACGTCG ATCTGCCGAT CGTCGCGCAG
GATTACGTGC ACCGGATCGG GCGTACCGGG CGCGCGGGCG CGAGCGGCGT GGCGGTGTCT
CTCGTGTGTG CGGATGAAGC CCCGCAACTG GCCGCGATCG AGGCGCTGAT CGGGCAGACG
CTGCGCCGGG AAGAAGAGCC GGGGTTTGAA GCGGAACACC GCGTGCCGGA AACCAGTTCG
ACCGGGCAGA TCATCAAGAA GCCTAAAAAG CCGAAGAAGC CCAAAGTGCC GCAAGGTGGG
GCGGCGGCCA CGCCGGTGGC CGGGAAAAAG CCGCAGCCGC AAGGCGGTGA CGGCAAGCGC
AAGGGTGGCG GAGCCGCGGG CAAGGGCGCA AGCGTGTTGA ACGGTAGCCC GTTCAGCGTG
CAAAAGCCGC GCGGCAAAGG CAAACCCGCT GGCAAGGCGG TTGCGGGCGC GCGCAAGCCG
GCCGGGAAGC CTGCGGGTGG TCGCGGTAAA CACTAA
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| Protein sequence | MTICCPVIAL AFALNRKPVS APTARIAVLA RNTSMSFASL GLIDPLLRNL QDLNYQTPTP
VQVKAIPAVL GGKDVMAGAQ TGTGKTAGFA LPLLQRLVQQ GPAVSSNRAR VLVLVPTREL
AEQVLQSFVA YGKGLDLRFL AAYGGVSINP QMMKLRKGVD VLVATPGRLL DLNRQNAVQF
DQVETLVLDE ADRMLDLGFA RELNAVFAAL PVQRQTLLFS ATFTDDIRTM AASILRSPVN
ISVSPPNVTG SKIKQWVVTV DKRNKPDLFM HLVAENNWDH ALVFVKTRNG VEYLAAMLDE
AGYAVDTIHG DKPQPARLRA LERFKTGEVQ MLVATDVAAR GLDIDDLPLV INVDLPIVAQ
DYVHRIGRTG RAGASGVAVS LVCADEAPQL AAIEALIGQT LRREEEPGFE AEHRVPETSS
TGQIIKKPKK PKKPKVPQGG AAATPVAGKK PQPQGGDGKR KGGGAAGKGA SVLNGSPFSV
QKPRGKGKPA GKAVAGARKP AGKPAGGRGK H
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