Gene Bamb_6255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6255 
Symbol 
ID4315159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp847193 
End bp848068 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content66% 
IMG OID638154099 
ProductHpcH/HpaI aldolase 
Protein accessionYP_778133 
Protein GI115360996 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.76273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCTG ATGCCGCGAT GCGCGCGAGC GTCGGACGCT CGGCGCCTGC CCAGTCATAC 
CTGTTCGTGC CGGGCAACAA GCCCGAGCGG TTCGACAAGG CGCTCGCAAG CGGCGCCGAC
GCGGTCATCA TCGATCTCGA GGATGCTGTC GAACCGGACG CGAAGGTGGC GGCGCGCGAT
GCGATCGCCC AGTGGGTTTC GCCCGAGCAT CCGGTGCTCG TGCGGATCAA TGCGCGGAAC
ACGCCGTGGT TCGAGGCCGA CGCCGCGCTT GGCGCGTTGA AGGGCGTGGC GGGTATCGTG
CTGCCGAAGG CCGCGCATGC GGACGATGTG TGCGCGGCCA TTGCGCTTGC GCGCCGGCGT
GTGCCCATTT ATCCGTTGAT CGAAAGCGCG CACGGCATGT GGAACGCGCT CGATGTCGCG
AAAGCGCCGT ACGTCGCGCG GCTGATGTTC GGCACGCTCG ATTTCATCGC GGACATGGGC
ATGTCGGACG ATGGCGTTTC GCTCAATCAC TTTCGGTCGC AACTGACGTT GATTTCGCGG
GTGGCCGGAA TCGAGTCGCC GGTCGACGGC GTGACGCCGG ATATTCACGA CGGGGAACGG
ATTGCGCGCG ACGCGCTCAA CGGGAAGCAA CTGGGATTCG GCGCGAAGCT CTGCATTCAC
CCGAAACAGA TCGCATTTGT GCACCAGTGC TATCGGCCGA GCGAGGATGA GGTGCGCTGG
GCGCGGCAGG TGCTCGATGC GATGCGCGAG TCGAATGGCG GCGTGGTGAC GGTCGACGGG
AAGATGGTCG ATCGGCCCGT GTTGCTGCGT GCGACGCGTA TCGATGAGCT GACCGCATCC
GCGGGCGTGG CAGCAGAAGG GGCGGCCCGC GCATGA
 
Protein sequence
MPSDAAMRAS VGRSAPAQSY LFVPGNKPER FDKALASGAD AVIIDLEDAV EPDAKVAARD 
AIAQWVSPEH PVLVRINARN TPWFEADAAL GALKGVAGIV LPKAAHADDV CAAIALARRR
VPIYPLIESA HGMWNALDVA KAPYVARLMF GTLDFIADMG MSDDGVSLNH FRSQLTLISR
VAGIESPVDG VTPDIHDGER IARDALNGKQ LGFGAKLCIH PKQIAFVHQC YRPSEDEVRW
ARQVLDAMRE SNGGVVTVDG KMVDRPVLLR ATRIDELTAS AGVAAEGAAR A