| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6235 |
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| Symbol | |
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| ID | 4315139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 812344 |
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| End bp | 816255 |
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| Gene Length | 3912 bp |
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| Protein Length | 1303 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638154079 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_778113 |
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| Protein GI | 115360976 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.411455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGAA CCAGCCTCCC TGTATCGCGC ATTGCGATAA CGGGTACTGC ATATCGTTTC
CCTGGCGATG CCGCTTGCCA CGAATCCTAC TGGGCGTTGC TCGAATCGGG ACGCACTGCG
GTCCGCGAGA CACCGATGGC CCGCTTCGAC ATCCAGCCGT TCTTCAGCGA AGACGCGAGC
GTGCCGGGGA CCACTTATGT GCGCAATGGC GGCTATGTGG AAGGCGCATT CGAATTTGAC
GCCGGCTTCT TCCGGATCTC CGAATCGGAA GCGCTCGCGA TGGATCCGCA ACAACGGTGG
ATGCTCGAGC TCTGCTGGGC GGCACTGGAA AATGCCGGCA TCGCGCCCGG CACGGTGCGC
GGGCAAAGCA TCGGCGTGTT TCTCGGCAGC GGCGAAGTCG ACTACGGCCG CCGCACCGTG
TGGGCCGGCG ACATGAGCAA GCTGACGACC TACGCGAGGC TGGGCGCGAG CCGACCGACG
CTGGCCGGAC GGGTGGCGTA TTTCCTCGGC GTGCACGGGC CCGCGGTGTT CGTCGATACG
GCCTGTTCCT CCTCGCTGAC CGCCGTTCAT CTGGCTGCGC AGAGCTTGCG TGCGGGTGAC
TGCGATATCG CGATTGCGGG CGGGATCAAT CTGATCCTGT CGCCGGAAGA GACGATCCTG
GGCGCTCGCC TGCAGGCCAT GTCGCCCAGC GAGATGTGCC GGCCGTTCGA CGCCCGCGCC
GATGGATATC TGCGCGGCGA GGGCGGCGGC GTGGTCGTGT TGAAGCGCAT CGACGACGCG
GTCCGTGACG GTGATCGCAT CGACGCGGTA CTGGCCGGCT CGGCCATCAA TAACGATGGC
GCGAGCAACG GTCTCACCGC ACCCAATGGC GCGGCGCAGG AAAGCGCGAT TCGGGTCGCG
CTGCGGCGCG CCGGCGTTGG CCCGGCGTCC GTCGCGTACG TCGAGGCTCA CGGCACCGGT
ACGCAACTGG GCGATCCGAT CGAATTGACT GCCTTGCGCA ATGCCTATAC GGCTGGCGTG
GAACGGGCGC GCCCGCTGCT GGTCGGCTCG GTCAAGGCGC AAATCGGCCA TCTCGAAGCG
GGCGCGGGTA TCGCGGGGTT GATCAAGGCG ATGCTGATCC TGAGCCGCCG CCGGGTGCCG
GTTCAGGCGA ATTTCGACGA TCCGACGCCG CGCTTTCGCT GGGACGACAG CCAGATTTGC
GTGCCGCGCA CCGGCGAGGA CGCGCTGGAC GAGAACGGAA TGGTGGGCGT CAACGGGTTC
GGGATCAGCG GCACCAACGT GCACCTGGTG CTGGCCGGCG CGGGCGCGCG CGAAGTCGCG
ATGGACGAGG AGCGGATCCC GCGCGTTCTG CCGCTTTCCG CCAGGTCGCC GGAGGCCGTC
GTTCGTTTGG CGCACGCATA CCGGAAGATG CTCCACACGG CCGGTCCCGC CGCGGGCGAC
ATTTGCTACA CGGCAAGCGT CAGGCGCGAT CACTGGCCTC ACCGCGCGGC CGTGGTGGGA
GACAGCCGGG AACAGCTGCT CGAGTCGCTG GACGATTTCC TGGCCGGCAA CGCCGAGGGC
AACTGGCACT CGGCCAGTGT CGCGAAATCG CGTCGGCTGG TTTTCCTGTT CCCGGGCCAG
GGCGCATGGA AACCCGGTGT CGGCGCGCAA CTGTACGACG ACAATCCGGT GTTTCATCGC
TTCGTCGACG AATGCCTCGC GTATCTGGAT CCCGCGCTGG CTGCGGATGT GATGGCCGCA
ATCCGCGGCC ATCATCCCGA GACGGTTCGC CATCGCCAAG GGCAACTTGC CCACTTCGTC
ATCCTCCATT CGCTGGCAAG GACATGGATC GAATCGGGCA ACCGACCCGA TGCCGTGGTC
GGCCATTCGC TCGGCGAGCA CGTCGCGGCG ACACTGGCCG GTGTGATGAC GCTCGAGGAC
GGCCTGAAGG CGGTCGAGGC GCGCGGCCGG TTGTTCGATA CCGCCACGCC GCGCGGCGCG
ATGCTCGCGG TCGCGGCCGG CGTGACGGAG TTGCAGCGCC TGTTCGAGTT CGGGGAAGTG
CTGTTCGTTG CCGGCATCAA TGGTCCGGAG CAGACGGTCG TCAGCGGCAC GGCCGCGGCA
ATCGAGGAAG TGCACGCCAC CATGGTCGCG ATGGGGCGGC GCGCATCGAT GCTCGGCACG
TACGACACGC CGGGGCATTC GCCGCTGCTG GCGCCGATGC GCCCGGCTTT CGCGCAGGCG
TTGTCGGCGC TTCGATTCAT GCCGCCGCGC ATCACGCTGA TCTCGACACT GACCGGCAAG
CCCGCCGGTG CCGAAATAGC GGGCATCGAG CATTGGCTGG ACCTGGTCGA GCGGCCGGTG
CTGTTTGCCG ATGCGCTGGG CCAGTTCGCC GATCAGGATT GCGTATTCCT GGAGGTGGGG
CCCGGTGCCG CGCTGTCGAA TCTGGCGCGC GCGGCGACGC AGAAGTGGGA AAGCGTCGTA
TCGTCGCTGG CGGACGCGCC GGGCGACGAC GCCACGGAAT CCATGAACTT CGCCCATGCA
TGCGCGCACC TGTACTGCCT CGGGTTCATG CGCGACTGGG CCGCGCTGTA TCCGCGCCCG
CCGCGGCCGG CTCAGGTGCC CACCTATCCG TTCGAGCGCG TGCATCTGGA ATTGCCGATG
ACGTTACGAG CGGCTGCATC GGTCGACACG GAAGTCGAAG GTACGGCGAC CGGTCGCGAC
GCCGGAATAT CACACGACGC GTCGAACACC GGACCGACGA GCGTTGAAGC GACATCGGGC
GACCTGTCGC GCGAGCGTGC GCACGTGCTC GACGCGATTC GTCGGATCGC GCGTTCCGTG
TCCAGCGGTG CCGCTGCGAT CGACGACGAC GTACCGCTCG CGGCCAGCGG CTTCGACTCG
CTTGCGCTGA CCGAGCTTCG GTCACGCATG CAGCACATGT TCGGACACAC GGTTCCGATG
GCGGTGCTTG CACGGGGCGC TTCGATCTCG AGGCTGGCCG AGCTCATGGC CGCGGCACCG
ATCGCCAAGG ACTCGGCGGC GCGGACTTCA CAAACGGTGC CGGCGGACAT GCGTGAAGCG
CTGCCGGCGC GGGGCGCTCC CGAAGATCGC GGCATGCGTG CACCACCGGC CGAGGAGCCG
CTCATCGTGC TGCGTCACGG CGAGGGCGAG ATGGTTGCGT TGATCCATCC GATCGGAGGC
GACGTGCTGT GCTACCAGGC GCTGGCGGAC GCGTGGCCCG GAGATCCCAC GATCGTCGGC
TTGCGGCATC CCGATGTCGA CCGGCCGACG CTGCCGTTCC ATCGACCGCT CGCCGAACTC
GCCAGCGGGT ATCGGGATGT GCTCGAGCGC GAGTTCGGGC GCCTGCCTGA TCGCGTCGGC
GGCTGGTCGT TCGGTGGCCT GGTGGCGCTC GAAATGGCGG CGCAGTGGGA GTCGGAGGGG
AAGGTGGCGC CGCCGCTGAT GCTGGTCGAC AGCCCGTTTC CCACGGGCGA CTTCGCGTTG
CGATTGAAGG AAATCGTTGG CTCGACGACC GCGTTGCCGT CACTCGCCGA CATCGACGCG
CTAGCGAAGG ATGCGCGCTT TGTCGCGTTG CTCGATCGCG ATCTGGGGCT TCTCGAGATG
CGGGCGCGGC TCGATCCCCC TGAGTTTGCG CGTATCTCAC GGCTCTATGC GTCGAGCGTG
GTCTCGATCG TCTCGCGAAG TTTCACCGCG CTGCGCGCGC CGATCCACTA CGCGTTGGCC
GCCAACGGCG GCAACGGCCG ATGCCGCGAC GATGTGTGGC CGCATCTCGC CCGCCTGACC
ACGGGCGCGA TCGAGGTGGA CGTGTTCGAC GACGACCACA ACTCGATCGT CGGTGGTGCA
TCCGTACGGC GGCTTGCGGC GCGGCTAGGG CGGCGCATCG CCGAAATGCA AGCAGCGGCG
AGCGGCGATT GA
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| Protein sequence | MQGTSLPVSR IAITGTAYRF PGDAACHESY WALLESGRTA VRETPMARFD IQPFFSEDAS
VPGTTYVRNG GYVEGAFEFD AGFFRISESE ALAMDPQQRW MLELCWAALE NAGIAPGTVR
GQSIGVFLGS GEVDYGRRTV WAGDMSKLTT YARLGASRPT LAGRVAYFLG VHGPAVFVDT
ACSSSLTAVH LAAQSLRAGD CDIAIAGGIN LILSPEETIL GARLQAMSPS EMCRPFDARA
DGYLRGEGGG VVVLKRIDDA VRDGDRIDAV LAGSAINNDG ASNGLTAPNG AAQESAIRVA
LRRAGVGPAS VAYVEAHGTG TQLGDPIELT ALRNAYTAGV ERARPLLVGS VKAQIGHLEA
GAGIAGLIKA MLILSRRRVP VQANFDDPTP RFRWDDSQIC VPRTGEDALD ENGMVGVNGF
GISGTNVHLV LAGAGAREVA MDEERIPRVL PLSARSPEAV VRLAHAYRKM LHTAGPAAGD
ICYTASVRRD HWPHRAAVVG DSREQLLESL DDFLAGNAEG NWHSASVAKS RRLVFLFPGQ
GAWKPGVGAQ LYDDNPVFHR FVDECLAYLD PALAADVMAA IRGHHPETVR HRQGQLAHFV
ILHSLARTWI ESGNRPDAVV GHSLGEHVAA TLAGVMTLED GLKAVEARGR LFDTATPRGA
MLAVAAGVTE LQRLFEFGEV LFVAGINGPE QTVVSGTAAA IEEVHATMVA MGRRASMLGT
YDTPGHSPLL APMRPAFAQA LSALRFMPPR ITLISTLTGK PAGAEIAGIE HWLDLVERPV
LFADALGQFA DQDCVFLEVG PGAALSNLAR AATQKWESVV SSLADAPGDD ATESMNFAHA
CAHLYCLGFM RDWAALYPRP PRPAQVPTYP FERVHLELPM TLRAAASVDT EVEGTATGRD
AGISHDASNT GPTSVEATSG DLSRERAHVL DAIRRIARSV SSGAAAIDDD VPLAASGFDS
LALTELRSRM QHMFGHTVPM AVLARGASIS RLAELMAAAP IAKDSAARTS QTVPADMREA
LPARGAPEDR GMRAPPAEEP LIVLRHGEGE MVALIHPIGG DVLCYQALAD AWPGDPTIVG
LRHPDVDRPT LPFHRPLAEL ASGYRDVLER EFGRLPDRVG GWSFGGLVAL EMAAQWESEG
KVAPPLMLVD SPFPTGDFAL RLKEIVGSTT ALPSLADIDA LAKDARFVAL LDRDLGLLEM
RARLDPPEFA RISRLYASSV VSIVSRSFTA LRAPIHYALA ANGGNGRCRD DVWPHLARLT
TGAIEVDVFD DDHNSIVGGA SVRRLAARLG RRIAEMQAAA SGD
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