Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6233 |
Symbol | |
ID | 4315137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 806469 |
End bp | 809972 |
Gene Length | 3504 bp |
Protein Length | 1167 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638154077 |
Product | 2-oxoacid ferredoxin oxidoreductase |
Protein accession | YP_778111 |
Protein GI | 115360974 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTAC GCAACGTCTC GCTGGCCGAC AAATACGCGT TGAGCGAGGA TCGCATTTTC ATCTCGGGTG CACAGGCCGT CGTACGCATG CTGTTGATGC AGCGCGAGCG CGATCGGCAA GCCGGGCTGA ATACGGGCGG TTTCGTGTCC GGCTATCGCG GCTCGCCGCT GGGCGGACTC GACCATCAGC TCTGGAAAGC CGGCAACGCG CTGGCCGCGG CCGATATCGT GTTCCAGCCG GGCCTCAACG AGGAATTGGC CGCCGCCGCG GTGTGGGGTT CGCAGCAGGC CGAGATGCTC GGTGAAGGCC GACGCGATGG TGTCTTCGCG CTCTGGTACG GCAAGGGACC GGGCGTCGAT CGGGCCGGGG ACGTCTTTCG CCACGCCAAT CTCGCGGGCT CATCGAAGCA TGGCGGTGCG CTGGCGCTGA TGGGCGACGA CCATCTCGCC GAATCGTCGA GCGCGGCGCA TGCCAGCGAA TTTGCTTTCG CGGATGCCAT GATTCCGATC CTGAATCCGG CCGGCGTGCA GGAGATCATC GAATACGGGC TGCTTGGCTA CGCGTTATCG CGCTATGCGG GCACCTGGGT GGCCATCAAG TGCGTGAAGG ACAACATCGA ATCGACCGCG TCGGTGGACC TGTCGACGAG CCGGATCGAT ATCGTCGTGC CGGATCTGGT GTTGCCGCCG GGCGGATTGA ACATCCGCCG GGAGGTCGAT GCGCTCGGGC AGGAGGAGCG CATGCTCGTC CACAAGCGTC GCGCGGCCGC CGCCTTCGTC CACGCCAATC GCCTGAATCG AATCGTGTTC ACGGGCGGCC CGCGCGCCCG GCTCGGCATC GTCACGACCG GCAAGAGCCA TCTGGATACG CTGCAGGCGT TGCGCGATCT CGGAATCGAC GCCGCGCGTG CCAACGCGCT GGGCTTGCGG CTGTTCAAGA TCGGCTGCCC GTGGCCGCTG GACCATGCGC ACGTCGCCGA GTTCGTGCAG GGGCTCGAAT GCGTCGTCGT GGTCGAGGAG AAGCGGGCGC TCATCGAAAC CCAGCTGCGC GAGCAGCTGT ATGGCACACG TCATTGCATG GCGATCGTCG GCAAGCACGA CGAGCAGGGG CGAGTGCTGT TTCCGCCGAC CGGTGCGCTG GATTCGAACC TGATCGGCAT CGCGTTGGGT GAACGCATTC TGGCGTTGTT CGGGCCGTCG GAAACGATTG CCGCGCGGTT GGCGAGATTG CGCGACGCGT GGGCGGCGCA GCTTGGCGCC AAGACGCTCG CCGCGCGCGT GCCGCACTTC TGCCCCGGCT GCCCGCACAA TTCGTCGACC CGGCTTCCCG AGGGCTCGAT CGCAGGTGGT GGAATCGGTT GCCATTTCAT GGCGATGTGG ATGGATCGCG GGACCATCGG CTTCACCGCG ATGGGCGTGG AGGGTGCGCA GTGGATCGGG CAGGCCCCGT TCTCGCGGCG CGACCATTTC TTCCAGAATC TCGGGGACGG CACCTACAAT CATTCGGGAT CGCTGGCGCT GCGATTCGCG CTGGCGGCCG GCGTCAACAT CACCTACAAG ATCCTGTTCA ACGATGCGGT GGCGATGACG GGAGGCCAGC CGGTCGAGGG CCGGCTGACC GTCGATGCGA TCGCGCGACA GGTGCATGCG GAAGGCGTCG AGCGCATCGC CGTGGTGAGT GACGAGCCGG ACAAATACGC GGGCGTGGCG CGGTTTCCCG ACGGCACCAC GGTTCACCAT CGTGCGGAGC TCGATGCATT GCAACGCGAA TTGCGCAACG TACCGGGTGT GTCGGTCCTG ATCTACGACC AGACCTGCGC GGCGGAAAAG CGGCGCCGTC GCAAGCGCGG CAAGCTACCC GATCCCGATC GCCGCGTGCT GATCAACGAA CTGGTATGCG AGGGCTGCGG CGATTGCGGT GTCGCGTCCA ATTGCGTTGC GATACAGCCG GTCGAAACGG AGTTCGGCCG CAAGCGGCGC ATCGACCAGT CGAGCTGCAA CAAGGATTTC TCCTGTGTCG ACGCGTTTTG TCCCGCGTTC GTCACCGTGC ATGGAGCGAA GCCGAAGACC GGTCACGGGG CGCTCGACGG GAGCGAGCCG ATAGCGGATT TGCCCACACC GGACGAGTAC CCCCTCGACC GCGGGTGGTG CGCGATCGTG AACGGTGTCG GTGGAACCGG CGTGATCACG ATCGGCGCGG TGCTCGGCAT GGCCGCGCAT CTGGAGGGCA AGGGCGTCGG CATCATCGAC ATGGCCGGTC TTGCGCAGAA GGGCGGCGCC GTGCATTCGC ATCTGCGGAT CGCGAGGACG CCGGCCGACG TCGACTGCGT ACATGTCGCA GCCGGCCAGG CAGATTTCGT TCTCGGTGGG GACCTGGTCG TGACGGGGTC CGGCAAGGTG CTCGCGACCC TCCGCCGAGG GCATACGCGT TGCCTGGTGA ACACGGCCGA GACCATGCCG GGCGACTTCA CTCGGTCCGC GGACTTCAGC TTGCCGGCGC AGTCGCTGAA GCATGCGATC CAGGATGCCG CCGGACCTGA CCAGACCCGC TTCTTCGATG CCACGGCCGC GGCGGTTGCG CTGTTCGGCG AATCGATCGC GGCGAATATG CTGTTGCTCG GCATGGCCTG CCAGCTCGGG AGCCTTCCGG TTTCGCCACA GGCAATCGAG AAGGCGATCG AACTGAACGG CGAAGCCGCC GCGATGAATC TCGCCGCGTT TCGCTGGGGC CGGCGCGCCG CGCATGCACC GGCGTCGGTG CTCGACGCGA TGTCCAATGT CGAGGCTACC CGCCGCGACA AGCCCGCCAC GACGATCCAC GAGGTCGTCG AGCGGCGGGC GGCATTCCTG ACCGATTACC AGGATGCGGC CTACGCGCGG CGCTATCGCG CGCATGTCGA GCGCATACGG GCGGCCGAGG CGTCGGCCGC GCCGGGTTCG TCCGCCGTGA CCGAGGCGGT GGCGCGCAAC CTGTTCCGGC TCATGGCAAT CAAGGACGAA TACGAGGTCG CGCGACTGTA TACGGACGGG CGATTCCGCC GGCAACTCGA AACGGAATTC GATGGTTACG ACCGGCTCGA ATTTCATCTG GCGCCGCCGC TGTTCGCTCG CCGCGATGCG CAAGGCCGGC CCGTGAAGGT GCGCTATCGG GAATGGATCA CCGCGGCATT CGGGGTGTTG GCGCGTCTGA AGCGCGTGCG CGGTACGTGG CTGGATGTGT TCGGCCATAC CGCCGAGCGC CGCATGGAGC GTGCATTGCT CACGCAGTAT GCCGACGATC TCGATCGCGT CGCCGAATTG ATCGGAGGCG GCCGTATCGA CGCGGCGAGG GAACTCGCAT CGATACCCGA GATGATCCGT GGCTTCGGGC ACGTGAAGGC CGCGAACGTC GCGCGTGCGA CGGACGCCCG GGCGCGACTG CTTGAGCGGA TCAATCAACC GGATCAGGCC GCTTCGTCGG AGGCGCCGAA GCGGGTGATC CCGGTTACGG TGGTGGAAGC CTAG
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Protein sequence | MTLRNVSLAD KYALSEDRIF ISGAQAVVRM LLMQRERDRQ AGLNTGGFVS GYRGSPLGGL DHQLWKAGNA LAAADIVFQP GLNEELAAAA VWGSQQAEML GEGRRDGVFA LWYGKGPGVD RAGDVFRHAN LAGSSKHGGA LALMGDDHLA ESSSAAHASE FAFADAMIPI LNPAGVQEII EYGLLGYALS RYAGTWVAIK CVKDNIESTA SVDLSTSRID IVVPDLVLPP GGLNIRREVD ALGQEERMLV HKRRAAAAFV HANRLNRIVF TGGPRARLGI VTTGKSHLDT LQALRDLGID AARANALGLR LFKIGCPWPL DHAHVAEFVQ GLECVVVVEE KRALIETQLR EQLYGTRHCM AIVGKHDEQG RVLFPPTGAL DSNLIGIALG ERILALFGPS ETIAARLARL RDAWAAQLGA KTLAARVPHF CPGCPHNSST RLPEGSIAGG GIGCHFMAMW MDRGTIGFTA MGVEGAQWIG QAPFSRRDHF FQNLGDGTYN HSGSLALRFA LAAGVNITYK ILFNDAVAMT GGQPVEGRLT VDAIARQVHA EGVERIAVVS DEPDKYAGVA RFPDGTTVHH RAELDALQRE LRNVPGVSVL IYDQTCAAEK RRRRKRGKLP DPDRRVLINE LVCEGCGDCG VASNCVAIQP VETEFGRKRR IDQSSCNKDF SCVDAFCPAF VTVHGAKPKT GHGALDGSEP IADLPTPDEY PLDRGWCAIV NGVGGTGVIT IGAVLGMAAH LEGKGVGIID MAGLAQKGGA VHSHLRIART PADVDCVHVA AGQADFVLGG DLVVTGSGKV LATLRRGHTR CLVNTAETMP GDFTRSADFS LPAQSLKHAI QDAAGPDQTR FFDATAAAVA LFGESIAANM LLLGMACQLG SLPVSPQAIE KAIELNGEAA AMNLAAFRWG RRAAHAPASV LDAMSNVEAT RRDKPATTIH EVVERRAAFL TDYQDAAYAR RYRAHVERIR AAEASAAPGS SAVTEAVARN LFRLMAIKDE YEVARLYTDG RFRRQLETEF DGYDRLEFHL APPLFARRDA QGRPVKVRYR EWITAAFGVL ARLKRVRGTW LDVFGHTAER RMERALLTQY ADDLDRVAEL IGGGRIDAAR ELASIPEMIR GFGHVKAANV ARATDARARL LERINQPDQA ASSEAPKRVI PVTVVEA
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