Gene Bamb_6232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6232 
Symbol 
ID4315136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp805349 
End bp806386 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content65% 
IMG OID638154076 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_778110 
Protein GI115360973 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA GTTCTCCTCA AGATAGTGAG CGCGGTGCGC GTCACACATC TACTCGCCTG 
AACGCACCGT TTCGCTCTTG CGTAATCGGT TGCGGCTCCG CTCTGCCGGA GCGGCGTGTG
ACGAACGATG AACTGGCACG GACGGTGGAT ACGTCCGACG AGTGGATCGT CAGGCGTTCA
GGCATCCGCG AACGAAGGAT CGCGGCGGCG CACGAGAAAA CCTCGGATTT CGCGATTGCC
GCAGCCCGCC GTGCGCTGGA GCGGGCCGAT CTGACCGGCG CCGATCTCGA CCTGCTCATC
GTCGCGACGA CCACCGCCGA TCAGACGGTG CCATCGACCG CCGCGCGCGT GCAGGCCGCG
ATCGGAATGC ATCAAGGCGC CGCTTTCGAT GTGAATGCGG CCTGTTCGGG GTTCGTGTAC
GCCCTTTCGG TGGCAGACAG CATGATGCGG CTCGGGCAAG TCGGTACCGC TCTGGTGATC
GGCGCGGAAA CGCTGTCGCG CATCGTCGAC TGGACCGAAC GTGAGAGTTG CGTACTGTTC
GGCGACGGTG CCGGCGCCGT GATCCTGCGG GCCGAGCCCA GTGACGGCAG CACGAACCAG
CGTGGTGTGC TCTCCACGCA CCTGCATTCG GACGGACGGC ATCAGGACAA GATTCGCACG
GATGGAGGCG TGTCGTCGAC CGGGACGGTC GGCAAGGTGC GCCTCGAAGG GCGCGAGGTG
TTCCTGCATG CCGTCATGAA TCTCACTGCC GTGGCGGACG AGGCACTCGC CGCGACCGGC
TTGTCGCGCG ATGACGTCGA CTGGCTGGTC CCGCATCAGG CCAACCAGCG CATCGTCGAA
ACCGTGGGAC AGCAACTGCA CATTCCGGCC GAGAAGACCG TGCTGACCGT CGATCGCCAT
GCCAATACCT CCGCGGCGTC GATCCCGCTT GCGCTGGATG CGGCGGTGAC GGACGGACGT
GTGAAGGAGG GCGACCTCGT GCTGCTCGCA TCGATGGGTG GCGGCTTTAC GTGGGGATCG
GCATTGCTGC GCTGGTAA
 
Protein sequence
MIESSPQDSE RGARHTSTRL NAPFRSCVIG CGSALPERRV TNDELARTVD TSDEWIVRRS 
GIRERRIAAA HEKTSDFAIA AARRALERAD LTGADLDLLI VATTTADQTV PSTAARVQAA
IGMHQGAAFD VNAACSGFVY ALSVADSMMR LGQVGTALVI GAETLSRIVD WTERESCVLF
GDGAGAVILR AEPSDGSTNQ RGVLSTHLHS DGRHQDKIRT DGGVSSTGTV GKVRLEGREV
FLHAVMNLTA VADEALAATG LSRDDVDWLV PHQANQRIVE TVGQQLHIPA EKTVLTVDRH
ANTSAASIPL ALDAAVTDGR VKEGDLVLLA SMGGGFTWGS ALLRW