Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6222 |
Symbol | |
ID | 4315126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 792351 |
End bp | 796265 |
Gene Length | 3915 bp |
Protein Length | 1304 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638154066 |
Product | beta-ketoacyl synthase |
Protein accession | YP_778100 |
Protein GI | 115360963 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.19899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCATT CTTCTTGCAG CGAGAACGGT ATGGACAGGT CAACTACACA CGCGGAACGG ATCGCCATCA TCGGCATGTC GTGCCGCTTT CCGGGTGGCG CGTCCTGTGC GTCGAGCTAT TGGACGCTTC TGAATTCCGG CCGTACGGCG ATTCGGGAAA CCCCGCGCGA GCGGTTCGAT ATCGACGCGT TCTACTCGCC GGATCCCGCT GAACCCGGCA CCACCTATTC GCGCGTGGCC GGCTACGTCG ACGATCCGTT CTGCTTCGAC CGCGGGCTGT TCCGCACGTC GGCGGCCGAG GCGATCGAGA TGGATCCGCA GCAGCGCTGG ATGCTGGAAC TGGCCTGGGA AGCGCTCGAG AACGCAGGGT TTGCGCCCGG TCAATTGCGC GGCAAGAATG TCGGCGTGTT CATGACGACC GGCGAAGCCG ATTATGGCCG GCGTACCGTG TGGTCCGGCG ATCCCGGAAA AATCACCACG TATTCGAAGC TCGGCAACCT GCGCGCAATG GCGCCCGGGC GCGTCGCGCA CATCCTGGGC TTGAGCGGGC CCGCGATCTT CGTCGACACC ACCTGCTCGT CGTCGCTCGT CGCGATCCAT CTTGCCGCGC AGAGCCTTCA GGCCGGCGAG TGCGACGTGG CGATCGCGGG CGGTGTGAAC CTGATCCTCG GGCCGGAGGA AACGATCGGC GTCGCGCGAC TTCAGGCGAT GTCCGTGTCC GGTCAGTGTC GCCCGTTCGA CGCGAACGCC GACGGCTACA TTCGCGGCGA AGGCGGTGGC GCGCTCGTCA TGAAGCGGCT GGGCGACGCA CGCACGCACG GTGATCGTAT CGACGCGGTG CTGGTCGGTT CCGCCGTCAA CAGCGACGGC GCGAGCAATG GCCTCACCGC GCCCAACGGC GCGGCGCAGG AAGCCGTGAT TCGTCGCGCG ATGGCGCGTG CGGGCGTGCG CCCGGAAGCG GTCGCCTACG TGGAAGCGCA TGGCACGGGT ACGGCACTGG GAGACCCGAT CGAGCTTTCC GCGCTGCGCA ACGTGTATGC GCGCGCCGTC ACGCGCGACA AGCCGATTCT CGTGGGCTCC GTGAAGTCGC AACTCGGACA TCTGGAAGGT GCGGCGGGCA TGGCGGGTTT CATCAAGGCG ATGCTGATTC TGCGTCATCG CCAGGTGCCC GCACAGGTGA ATTTCGCGAC GCCGAATCCG CGCTTTCACT GGGAAGGCGC GCAACTCGAG ATTCCGCGTG ACGGCATGCC GCTGGGCGAC GGCAATGCGT TCGTCGGCGT GAGTGGCTTC GGCATCACCG GCACCAACGT CCATATGATT CTCGCCGAGC CGGACGCGGC GCCGGATACC GCCGCGCAGG TCGCTCGCGA ACGCGTGCTG ACGCTGTCGG GACGCTCGCC GCAAGCGCGC CGGCGTGCCG CATCCGCGTG GCGCGCATGG CTCGCTGACA CCCCCGCGCC GATGCGCGAT GCGTGCCACA CGGCGAGCGT GCGGCGCGAT CATTTCGATC ATCGCGTCGC GCTGGTCGGG ACGACGAAAG CGGATTTCGT TGCCGCACTC GATGCCTTTC TCGCCGAGGA CCCGACGGGA CACTGGCATG CCGGCGAGCA ACCGCGCAAG CCGCGTCTCG CGTTTCTCAT CCCCGGTCAA GGGGCATGGC AACCCGGTAT CGGGCGCAAT CTCTGCGAAG ACAACGTCCT GTTCCGCAAA CACGCGGATG CGTGTCTGGG CCAGCTCGAC GCCGATACGG CACGCGAGGT GCTCGATGCG ATCGTCGGCC GGACCGCCGA AGCGGTGCGC CATCATCCCG GGCAACTCGC GCATTTCGTC GTGTGCTATG CGCTGGCGCG TACCTGGATG GATCTCGGCG TGCAGCCCGA TCTGCTGATC GGGCATTCGT TGGGTGAGCA TGTAGCCGCC GTGATCGGCG GCGTGATGTC GGTCGCCGAG GGCCTGAAGG CGGTCGAAGC GCGCGGCCGC CTGTTCGATA CGGCGACGCC GGCAGGCGCG ATGCTCGCTG TCGCCGCGAG CGTGGATGAA CTCGCCGCGC GCTTCGCGTT CGGCACGGAC TTGTTCGTGG CAGGCATCAA CGGGCCGGAG CAAACCGTCG TGAGCGGCAC GCAGGCGGCG ATCACGCGGG TTCAGGACGC GATGGTCGCG GCCGGCAAGC GTGTGTCGTT GCTCAAGACC TACGGCACGC CGGGCCATTC GCCGATGCTG CGTTCGATGC GCGAAGCGTT CCGGCAGGCA CTCGAACCGC TGACGCTGGC GGCGCCCGCG ATCCCGATCG TCTCCACACT CACCGGCGCG CTCGCGACAG ACGCGATCGC GAGTGTCGAG CATTGGCTGG ATCTCGTGGA GCAGCCGGTG CGCTTTCATG AAGCGTTGCT CGCGGCGTCC GACGGCAAGA CGATCTTCGT CGAAGTGGGG CCCGGCGCGG CGCTGTCGAA GCTCGCGCGC GCGGCCGCGG GCGGCGACTG GCAATGTGCG GTCTCTTCGC TTGCCGATGG GCCGGACGGC GATGAAGAAA CGGAGTCGAC CGGCTTCGCG CATGCGTGCG CACGCCTCTA CAGCATCGGG CAGAAGATTG CGTGGCGCAA ACTCTACGGC AACGCGCCGC GGCCTGCCGA AGCGCCGGGC TATCCGTTCG AGCGCGATCG CTTCGAATTG CCGTTCCCGG AGCATGTGCT TGCGGCTTCC GCGCAAGGCG GTACGCAGCA TCGGCGCGAC ATCGCGTCGG GCGAGGTGCC GCTGCAACAC GCTTCGCACG TGGCGGAGAT TGGCACTGAC ATCGCGAGCG TTGACGTTGA GCAACTGCTC GCGACACTCC GCACCATCGC GGCGGCCGTC ACGCCGGATA GCGTGACGCT GGCCGACGAT CTTTCACTCG TCAGTCAGGG CCTCGATTCG TTGGCGTTGA CGGAATTGCG CGTGCGCCTG CATCAGCACT TCGGCAGGAT GCCGCCGATT TCCATGCTCG CACGCGGTGC ATCGCTATCG ACGCTGGCTC GGTGGTTCGG CGCATCGTCG GGCACTACAC CGATTCAGGA ACCCGTATCG AGCGACACGC AGAAAGCGGC CGATGCACCG GGCGACCACG GATTGCTCGT CACGCTGCGC AATGGCGCGG GGCCGCTCGT CGCACTGGTG CATCCGGTGG GCGGCAACGT GCTCTGTTAT CAGGATCTGG CCAACGGCTG GCCGGGCGAT CCGACCATCG TCGCGATTCG CCATCCGTAT GCGGACCAGG ACCGCCCGCC TGCGTATCTG TCGATCGCGC AATTGGCGTC GCGTTATCGC GCGGCGTTGC TTGCCGCACA TGGCACGCTG CCCGATGTGC TCGGCGGCTG GTCGTTCGGC GGCATTGTCG CGCACGAAAT GGCGGCGCAG TGGGAAGCGG AGGGCAGGAC CGCGCCGCCG CTGGTGATCG TCGATACCCC GCTCCATGAA GGCGAATTCG CGACGCGGCT GCGCGCGCTT GCCGGCGATT TCGTCAATGA GGACGCCACG CAGGTCGTCG AAGCGTGGCT CGCCGATCCA CGCTTCGACA CGATGCTCGA TCGCGACTTC TACCTGGCTG ACGTGCGGCG CCGCGCGCAT CCCGCCACGT TCGCCCACAT CTCGCGGCTG CATGCCGTGA GCGCGGTGGC GCTCGCGCGT CACCGGCCCC ACCAGGTGCG CACGCGAATC GACTACGCGC TCGCCAATCG CAACGCGGGC GGCATGTCCG GTACGCAGGT GACGCAGTAT CTGCGGCGGC TCACGGGCGG CAGCGTCGCG GTGAGCGTGT TCGACGACGA TCACAACTCG ATCGTGCGTG AGCCCTCCGC GCGCCGCGTC GCGGCTTTCC TCGATGGCAG TCCGGACGCC ACGCGTGTCG GGTTCGAGCC GCTTGCGCAG GAGACGCCCG CATAG
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Protein sequence | MKHSSCSENG MDRSTTHAER IAIIGMSCRF PGGASCASSY WTLLNSGRTA IRETPRERFD IDAFYSPDPA EPGTTYSRVA GYVDDPFCFD RGLFRTSAAE AIEMDPQQRW MLELAWEALE NAGFAPGQLR GKNVGVFMTT GEADYGRRTV WSGDPGKITT YSKLGNLRAM APGRVAHILG LSGPAIFVDT TCSSSLVAIH LAAQSLQAGE CDVAIAGGVN LILGPEETIG VARLQAMSVS GQCRPFDANA DGYIRGEGGG ALVMKRLGDA RTHGDRIDAV LVGSAVNSDG ASNGLTAPNG AAQEAVIRRA MARAGVRPEA VAYVEAHGTG TALGDPIELS ALRNVYARAV TRDKPILVGS VKSQLGHLEG AAGMAGFIKA MLILRHRQVP AQVNFATPNP RFHWEGAQLE IPRDGMPLGD GNAFVGVSGF GITGTNVHMI LAEPDAAPDT AAQVARERVL TLSGRSPQAR RRAASAWRAW LADTPAPMRD ACHTASVRRD HFDHRVALVG TTKADFVAAL DAFLAEDPTG HWHAGEQPRK PRLAFLIPGQ GAWQPGIGRN LCEDNVLFRK HADACLGQLD ADTAREVLDA IVGRTAEAVR HHPGQLAHFV VCYALARTWM DLGVQPDLLI GHSLGEHVAA VIGGVMSVAE GLKAVEARGR LFDTATPAGA MLAVAASVDE LAARFAFGTD LFVAGINGPE QTVVSGTQAA ITRVQDAMVA AGKRVSLLKT YGTPGHSPML RSMREAFRQA LEPLTLAAPA IPIVSTLTGA LATDAIASVE HWLDLVEQPV RFHEALLAAS DGKTIFVEVG PGAALSKLAR AAAGGDWQCA VSSLADGPDG DEETESTGFA HACARLYSIG QKIAWRKLYG NAPRPAEAPG YPFERDRFEL PFPEHVLAAS AQGGTQHRRD IASGEVPLQH ASHVAEIGTD IASVDVEQLL ATLRTIAAAV TPDSVTLADD LSLVSQGLDS LALTELRVRL HQHFGRMPPI SMLARGASLS TLARWFGASS GTTPIQEPVS SDTQKAADAP GDHGLLVTLR NGAGPLVALV HPVGGNVLCY QDLANGWPGD PTIVAIRHPY ADQDRPPAYL SIAQLASRYR AALLAAHGTL PDVLGGWSFG GIVAHEMAAQ WEAEGRTAPP LVIVDTPLHE GEFATRLRAL AGDFVNEDAT QVVEAWLADP RFDTMLDRDF YLADVRRRAH PATFAHISRL HAVSAVALAR HRPHQVRTRI DYALANRNAG GMSGTQVTQY LRRLTGGSVA VSVFDDDHNS IVREPSARRV AAFLDGSPDA TRVGFEPLAQ ETPA
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