Gene Bamb_6212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6212 
Symbol 
ID4315116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp782846 
End bp783568 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content64% 
IMG OID638154056 
Productcytochrome c oxidase, subunit III 
Protein accessionYP_778090 
Protein GI115360953 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGC CCACGCTCCC CACCGAATCG TCTGTCGGCG AATCGGCCGA CATCGCCCCC 
ACCGACGTCG GGCCCGACGG CTGGCGCGGT ATCGTCACCG ACTGGGCGGG CGACCGCGAA
GCCTTCAAGG TGCCGTGGGG CAAGGCGATG ATGTGGATCT TCCTGCTGTC GGACACCTTC
GTCTTCAGCA GCTTCCTGAT CGGCTACATG TCGGTGCGCA TCTCGACCAC CGCGCCGTGG
CCCGATACGT CCAAGGTATT CGGGCTCACG GTGGGCGGCG TGGACGTGCC GTTGCTGCTG
ATCGCGATCA TGACGTTCAT CCTGATCAGC AGCAGCGGCA CGATGGCGAT GGCCGTCAAC
TTCGGCTACC GGCGCAACGC CAAACGCGCC GCCGTGCTGT TGCTGGCGAC CGCGCTGCTG
GGCGCGGCCT TCGTGTCGAT GCAGGCGCTG GAATGGACGA AGCTGATCGT CCATGAAGGT
ATCCGCCCGT GGGGCAACCC GCTGGGCGCG GCGCAGTTCG GCGCGTGCTT CTTCACGATC
ACCGGGTTCC ACGGCTTTCA CGTGACCTGC GGCGTGATCT ACCTGCTGCT GATCGCACGC
AAGGTGCTGC AACCGGGGTT CACCGAGCAC GGCAACTTCC AGATCGTCGA GATTGCAGGC
CTGTACTGGC ACTTCGTCGA CCTGGTGTGG GTGTTCATCT TCGCGCTGTT CTACTTGTGG
TGA
 
Protein sequence
MTVPTLPTES SVGESADIAP TDVGPDGWRG IVTDWAGDRE AFKVPWGKAM MWIFLLSDTF 
VFSSFLIGYM SVRISTTAPW PDTSKVFGLT VGGVDVPLLL IAIMTFILIS SSGTMAMAVN
FGYRRNAKRA AVLLLATALL GAAFVSMQAL EWTKLIVHEG IRPWGNPLGA AQFGACFFTI
TGFHGFHVTC GVIYLLLIAR KVLQPGFTEH GNFQIVEIAG LYWHFVDLVW VFIFALFYLW