| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6175 |
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| Symbol | |
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| ID | 4315079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 742635 |
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| End bp | 744872 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638154019 |
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| Product | exopolysaccharide transport protein family |
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| Protein accession | YP_778053 |
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| Protein GI | 115360916 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.412348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC CCTCCGCCCC GCCGCAGCAA ACCGCCGAAG ACGGCAGCGA GACCGATTTC
GTCGCGGTGC TCGACATCCT GCTGGAAAGC CGCTGGCTGA TCGCGGCCAT CACGTGCGTG
GTGCTGGCCG CCGGCCTCGC ATACGCGATT CTCGGCAAGC CCGTGTTCGA AGCCAACATC
ATGGTCCAGG TCGAGGACAG CCCCGACACG TCGGCCGCCA AGTCGTTGCT GGGCGATGTG
TCGTCGCTGT TCGACGTGAA GTCGTCGGCC GCCGCCGAAC AGCAGATCCT CGCGTCGCGA
CTGGTCGTCG AACGCGCGGT CGACAGGCTC AACCTGTTCA TCGACGCGTC GCCGAAGCGC
TTTCCGGTGA TCGGCGACTG GATCGCGCGC CACCGCGACG GCCTGTCCGA CCCCGGCCTG
GCCGGCTTCG GCGGCTACGC CTGGGGCCGC GAGCGCATCG ACGTGCCGCG GTTCGACGTA
CCGCGCAAGA ACGAAGGCGA CGCGTTCACG CTGACGAGCC TCGGCGGCAA GCGCTATCGG
CTCGAAGGCG GCGATCTCGA CGACGCAGTC GAGGGCACGG TCGGCATGCT CGAAACGTTC
CGCTCGCCGC GCGGCCCGAT CACGCTTCAG GTCGCGTCGA TTGCCGCAAA GCCCGGCGCC
GCGTTCGTGC TGGTGCGCAA CTCGCGGCTG AAGACGATCG AGGACATCCG CGACCGCCTC
AACGTGCAGG AGCGCGTGAA GCAATCGGAC GTCGTCGTCG CCAGCCTTCA GGATACCGAT
CCGAAATGGG TCAGCGACAC GATGAACGAG ATCGGTCGCC AGTACGTGCG GCAGAACATC
GAGCGGAAAT CGGCGGAGGC CGCACAGTCG CTCGAATTCC TGACCGCACA GCTGCCGCAG
CTTAAGCAGC AGTTGACCGA TTCCGAAGCG CGCCTGACGA AGCTGCGCAA CGAGCACGGC
ACGGTCGACC TTACCGAGGA AGCAAAACTC GCGCTGGCGC AGACCGCCGA CGCGAAGACG
CGCCTGCTCG AGCTGCAGCA GAAGCGGCAG GAGCTGATGT CGCGCTTCAC CGAACGGCAC
CCGAGCGTGG CCGTGATCGA CGAGCAGATC GCCGCGCTGA ACGGTTATCG CAGCACCGCC
GAGCAGCAGA TCCGGCGTCT GCCGGACCTG CAGCAGGAAA CCGTGCGGAT GATGCTCGAC
GTGAAGGTCA ACACGGACCT CTACACGGCG CTGCTGAACA ACATGCAGCA GCTGCAGCTC
GTGCAGGCCG GCAAGGTCGG CAACGTGCGC CTCGTCGATA CGGCGGCGGT GCCGGAAGTG
GCGGTGCGGC CGAAGAAGGT GCTCGTCGCG CTGGCGTCGC TGCTGCTCGG GCTGCTCGCC
GGATGCGGCA CCGCGATCGT CCGCTCGATG CTGTTCCACG GGATCTCCGA TCACAACGAG
ATCGAGCGCC GTCTCGGCCT AGCGGTGTAC GCGACGGTCC CGATCAGCGA CCATCAGCGC
GACCTGGCCG AGGAGGCCGC GCGCAAGAGC GGCCACAGGT CGATCCTGTC GATCGACTTC
CCGAACGAGC CGGCCGTCGA GTGCCTGCGC AGCCTGCGCA CCGCATTGCA GTTCGCGATG
CTCGAGGCGA AGAACAACGT CGTGCTGATC GCGGGTCCGG CGCCGGGTGT CGGCAAGACC
TTCCTCTCGT CGAACCTCGC CGTCGTGATG GCGAGCGCCG GCAAGCGCGT GCTGCTGATC
GACGGCGACA TTCGCAAGGG CCGGTTGCAC GACTATCTCG GCTTTCCGCG CGGCCGCGGC
TTCACCGAGC TGATCGCCGG CAGCGCGCGC GTGGAGGACG TGATTCACCG CGAGGTGGTC
GACGGTCTCG ACTTCATCTC GACCGGCACG ATGCCGAAGA ATCCCGCGGA ACTGCTGCTG
AACCGCAATC TCGCGACGCT GGTCGGCGAT CTGTCGTCGC GCTATGACAT CGTCGTGATC
GACTCGGCGC CGGTGCTCGC GGTGCCCGAT ACCGGCATTC TCGGCGCGGT CGCCGGCACC
GCGCTGCTCG TCACGATGGC AGGCAAGACG AAGCTCGGCG AGATCGGCGA ATCCGCGAAG
CGCTTCGCGC AGAACGGCAT CCGCCTGAAC GGCGTGATCT TCAACGGTGT CAATCCGCGG
CTCGGACAGT ACGGGTACGG GTCGAAATAT GGCGGTTACC GCTATGTCGC CTACGAATAC
GGGGCGCAAG ATGCGTGA
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| Protein sequence | MTQPSAPPQQ TAEDGSETDF VAVLDILLES RWLIAAITCV VLAAGLAYAI LGKPVFEANI
MVQVEDSPDT SAAKSLLGDV SSLFDVKSSA AAEQQILASR LVVERAVDRL NLFIDASPKR
FPVIGDWIAR HRDGLSDPGL AGFGGYAWGR ERIDVPRFDV PRKNEGDAFT LTSLGGKRYR
LEGGDLDDAV EGTVGMLETF RSPRGPITLQ VASIAAKPGA AFVLVRNSRL KTIEDIRDRL
NVQERVKQSD VVVASLQDTD PKWVSDTMNE IGRQYVRQNI ERKSAEAAQS LEFLTAQLPQ
LKQQLTDSEA RLTKLRNEHG TVDLTEEAKL ALAQTADAKT RLLELQQKRQ ELMSRFTERH
PSVAVIDEQI AALNGYRSTA EQQIRRLPDL QQETVRMMLD VKVNTDLYTA LLNNMQQLQL
VQAGKVGNVR LVDTAAVPEV AVRPKKVLVA LASLLLGLLA GCGTAIVRSM LFHGISDHNE
IERRLGLAVY ATVPISDHQR DLAEEAARKS GHRSILSIDF PNEPAVECLR SLRTALQFAM
LEAKNNVVLI AGPAPGVGKT FLSSNLAVVM ASAGKRVLLI DGDIRKGRLH DYLGFPRGRG
FTELIAGSAR VEDVIHREVV DGLDFISTGT MPKNPAELLL NRNLATLVGD LSSRYDIVVI
DSAPVLAVPD TGILGAVAGT ALLVTMAGKT KLGEIGESAK RFAQNGIRLN GVIFNGVNPR
LGQYGYGSKY GGYRYVAYEY GAQDA
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