| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6162 |
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| Symbol | |
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| ID | 4315066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 727289 |
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| End bp | 729016 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638154006 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_778040 |
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| Protein GI | 115360903 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.114811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TCTCGGCTTC GACGCGCCGA CTGGCAACGA TCGGAATCGC GGCAGCCGTC
GCCATCGCCT TGAATCCCGG CCTCGTGGAC GCCGCCGCCG ATTATCCGGC CGTCACGTAC
CAGCGCCTCA CGGACGCGCA ACGCGATCCC GGCTGGCTCA CCTACTACCG CACGTACAAC
GGCCAGTCGC ATTCGCCGCT CAAGCAGATC GATCCGTCGA ACGTGAAGCA GCTCACGCAG
GCGTGGAGCT ACAAGTTTCC GGCCCAGTTG AAGCAGGGTT TCGAAGCCAC GCCGATCGTC
AACGGCCGCT ACCTGTTCGT GACGACGCCG AAGGACAACG TATACGCGTT CGACGCGGCC
ACCGGCGCGC AGCTGTGGAA ATACGAACCG AAGCTCGGCG CGGAATCGTT CAAGACGGCC
TGCTGCGACG TGGTGAACCG CGGCGTCGCG CTGTACGGCA AGAACGTCTA CGTCGCGATG
CTGAGCGGCG AAGTGGCCGC GCTCGATGCG CAGACCGGCG CGCTCGTGTG GAAGAAGCAG
ATGTTCGAGC CGGGCCTCGG CTACTCGTTC TCGCTCGCGC CGCTCGCGAT CGACGGTGCA
ATCGTGGTCG GCAGCTCGGG CGGCGAGTAC GGCGCGCGCG GCTTCATCGC CGCGTTGAGC
CCGAACGACG GCGCGCTGCT GTGGAAGCGC TACACGATCC CCGGCCAAGG CGAGAAGCAC
GCCGATACCT GGCCCGACGG CATGCAGGCG CACGGCGGCG CACCGGCCTG GCTGACCGGC
ACCTACGACG CGGCGACGCG CACGCTGTAC TGGGGCGTCG GCAACCCGGG GCCGTGGCTC
GCGGACCTGC GCCCGGGCGA CAACCTGTAC TCCGATTCGC TGCTCGCGCT GGACCCGAAG
AACGGCGACC TCAAGTGGCA CTACCAGTAC ACGAAGCACG ACACCTGGGA CTACGACGGC
GTCAACACGC CGGTGCTCGC GACGATCAAG TACAAGGGCA AGGAACACGA CGCGATCATC
CACGCGGACC GCAACGGCTA CTTCCACGCG ATCGATCGCG ACACCGGCAA GCTGATCTAC
GCGGAACCGT TCGTGAAGGC GACGTCGGTC ACCGGCTACA CGGAAGACGG CGCGCCGATC
CAGGATCCCG CGAAGTATCC GAAGGTCGGC ACGACGATCG ACACGTGCCC GAGCTTCCTC
GGCGGCAAGA ACTGGTGGTC GGTGTCGTAC GACCCGCAAC GCCATCTCGC GATCGTGCCG
TCACTGCATG CGTGCATGAG CCTGTCGGGC AAGTCGGTCA ACTATATGGA AGGGCTGCCG
TATCTCGGCG AAGGCTTCGA GATCAAGCCC GAGCCGGGCA GCGAAGGCTA CGGCGAACTC
CAGGCGATCG ACGTGAACAC CGGCAAGAAG GTATGGAGCC ACTGGAGCAA GCTGCCGTGG
AACGGCGGCG TCGCGACGAC CGCAAGCGGC CTCGCGTTCA GCGGCTCGCT CGACGGCCAC
CTGTACGCAT TCGACGTGTC GACCGGCAAG GTGCTGTGGG AAAGCCCGAA GCTGGCGAGC
GGGATCATCG CGCAGCCGTC GGTGTTTGAA GTCGATGGCA AGGAGTACGT AGCGGTACTG
GCCGGCTACG GCGGCGCGAA CCCGATCTGG GGCGGCCCGA TGGCCAAGGC GGCGGACGAC
GTGCCGCGCG GCGGCACGCT GTACGTGTTC GCCCTCGACC GCGGCTGA
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| Protein sequence | MKKLSASTRR LATIGIAAAV AIALNPGLVD AAADYPAVTY QRLTDAQRDP GWLTYYRTYN
GQSHSPLKQI DPSNVKQLTQ AWSYKFPAQL KQGFEATPIV NGRYLFVTTP KDNVYAFDAA
TGAQLWKYEP KLGAESFKTA CCDVVNRGVA LYGKNVYVAM LSGEVAALDA QTGALVWKKQ
MFEPGLGYSF SLAPLAIDGA IVVGSSGGEY GARGFIAALS PNDGALLWKR YTIPGQGEKH
ADTWPDGMQA HGGAPAWLTG TYDAATRTLY WGVGNPGPWL ADLRPGDNLY SDSLLALDPK
NGDLKWHYQY TKHDTWDYDG VNTPVLATIK YKGKEHDAII HADRNGYFHA IDRDTGKLIY
AEPFVKATSV TGYTEDGAPI QDPAKYPKVG TTIDTCPSFL GGKNWWSVSY DPQRHLAIVP
SLHACMSLSG KSVNYMEGLP YLGEGFEIKP EPGSEGYGEL QAIDVNTGKK VWSHWSKLPW
NGGVATTASG LAFSGSLDGH LYAFDVSTGK VLWESPKLAS GIIAQPSVFE VDGKEYVAVL
AGYGGANPIW GGPMAKAADD VPRGGTLYVF ALDRG
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