| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6157 |
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| Symbol | |
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| ID | 4315061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 720134 |
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| End bp | 721201 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638154001 |
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| Product | porin |
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| Protein accession | YP_778035 |
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| Protein GI | 115360898 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0964625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA GAATCGTGAT CGGTTGCGCC GCGCTGGCGG GCGCGATAGC CAGCACCGGC
GCCTTCGCGC AAAGCAGCGT GACGCTGTAC GGCAACCTCG ACGCCGCATT GCTGTACACG
AGCAAGACGC TCGACGCCGC CACCGGCGCG AACGCCGGCC ATCAGTTCGC GATGACCGAC
ACCGGCATGA CGCCGACGAC CTTCGGGATG ACCGGCACCG AGGATCTCGG CGGCGGCCTG
AAGGCGAAAT TCCAGCTCGA AAGCGGCTTT GCCGTCACCA ACGGCGCGTT CGCCCATTCG
AACGGCAACT TCTTCGGTCG CCAGGCGTGG GTCGGGCTCG ACGGCGGCTT CGGCACGATC
AAGGCTGGCG TGCAGTACTC GCCGTTCCTG CTCGCGATCT TCGATTCGGA TCCGCGCAAC
TTCTCGCACT TCGGCAGCGG GCTGATCAAC TACGTCGACA ACGTGCTCGT GACGGGCCTG
TTCAATCCGA ACGCCGTGTC GTATACGAGC CCGACGATCG CCGGCCTCAC CGGCAGCGCG
ATGTTCGCGT TCGGCGGCAA GGCCGGCGAC TTCCAGGCCG GACGCCAGTA TTCGGCGAGC
GTCAAATACG AGCACGACGG CTTCATGATC AACGCCGCGT TCTACGACGG CAACGACGGC
ACCAACCCGA CGCCGACGCC GAGCACCGTC GCGTTCGTCG GCCGCACGAT CGGCGCCGCG
TACCGGTTCG GCCCGGTCAC CGCGAAGGCG TCGTTCGCGA GCTACAAGGT CGGCGGATCG
TTCAGCAACA ACGTATACGG CGGCGGCCTC GACTACCAGG CGACGCCGGC CGTCGACCTG
AACGGCGGCG TCTGGTTCAC CAGCGACCGC AACGACACGG CCAATCACTC GCTGCTCGCG
GCTGTCGGCA CGACCTACAG CCTGTCGAAG GCCACCGCGC TGTACGCGCA GGTCGCGATG
GTCAACAACC ACGGCGCGAT GAACACCGGG CTCGGGATCA ACAACGCGCT TTACGCGGTC
ACCGGAACGA CCATCGGCGC GAACCTCGGG ATTCGCCACC TGTTCTGA
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| Protein sequence | MKNRIVIGCA ALAGAIASTG AFAQSSVTLY GNLDAALLYT SKTLDAATGA NAGHQFAMTD
TGMTPTTFGM TGTEDLGGGL KAKFQLESGF AVTNGAFAHS NGNFFGRQAW VGLDGGFGTI
KAGVQYSPFL LAIFDSDPRN FSHFGSGLIN YVDNVLVTGL FNPNAVSYTS PTIAGLTGSA
MFAFGGKAGD FQAGRQYSAS VKYEHDGFMI NAAFYDGNDG TNPTPTPSTV AFVGRTIGAA
YRFGPVTAKA SFASYKVGGS FSNNVYGGGL DYQATPAVDL NGGVWFTSDR NDTANHSLLA
AVGTTYSLSK ATALYAQVAM VNNHGAMNTG LGINNALYAV TGTTIGANLG IRHLF
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