| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6124 |
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| Symbol | |
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| ID | 4315028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 684190 |
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| End bp | 684768 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153968 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_778002 |
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| Protein GI | 115360865 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0246328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCGTC GCACTTCCCT GACCGGCGCG GCGGTCGTGG GCTCGCCGGA CGCGGCCGCC
GCGGACGGTG CGGCGCCGGG CCGGCCGCGC GCGGCCGCGC CGCTATTGCA CTGCGCGAAC
GACCTGCTGT TCCGCGCGCT GGCCGTGATT GCGTCACTGT GTCTCGCGGC GCTCACGCTG
CTGGTTTTCT ACGCGGTCGT GATGCGCTAC GTGTTCGAGA ATGCGCCCGA TTTCGTCGAG
CCGATCGCGC TGCTGCTGGT GATCGTGATC GCGATGTTCG GCGCGGCGAT GAAGGTGCGC
GACGGCGGCC ATATCGGCCT CGACTCGTTC GTGCGGCGCC TGTCGCCGGG CCCGCGCACC
GTGGTGATCG CGATCCAGCA CCTGAGCCTG ATCGCGTTCG CGATCGCGAT CATGGTCGGC
TGCGGCAGCA TGGCCGCCGA GACGATGGCC GACCGCATCC CGATCATCGG GCTGCCCGAA
GGCGTGCGCT ACCTGATCAC GATTCCCGCG GCGATCGCGA TCGTCCTCTT CTCGCTCGAG
CACCTGCTCG CGCTTCGTCG TTCTTCGTCG GGACAATAA
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| Protein sequence | MTRRTSLTGA AVVGSPDAAA ADGAAPGRPR AAAPLLHCAN DLLFRALAVI ASLCLAALTL
LVFYAVVMRY VFENAPDFVE PIALLLVIVI AMFGAAMKVR DGGHIGLDSF VRRLSPGPRT
VVIAIQHLSL IAFAIAIMVG CGSMAAETMA DRIPIIGLPE GVRYLITIPA AIAIVLFSLE
HLLALRRSSS GQ
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