Gene Bamb_6115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6115 
Symbol 
ID4315019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp676025 
End bp676495 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content56% 
IMG OID638153959 
Productglycosyl hydrolase family 32 protein 
Protein accessionYP_777993 
Protein GI115360856 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1621] Beta-fructosidases (levanase/invertase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.179958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.162592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGCTC GTCAGACACC GCTTCATGGC GACCATTCTC GCCAAAATCA GTGTCCGAAT 
TCATTCGGCC ACTACACATC TGATAAATCC ATCTACGATT CGGCCCAGCG GGCCGGCCTT
ATTGTGCGAG GCTCGGCGAA TGGTGATGTC GGCACCTGGA TCTTCTACGA CACCGCTAGC
CAGACCCTCA CGCTCGACCG CTCTAGGTCC GGCAACATCC GATTCTCGAA CGCGTTCAGC
AAGCAGCACA TTGTCAATAT GCCGTTGGAG AACGGGAAGT TGCGCCTTAC CGTACTGGTC
GACCGGAATT CAGTGGAAGT GTTTATGGGC GACGGCCGTA CTGTCATCAC CGACCTCATC
TTTCCGGCAC CCGACGACAA TCGCGTTTCG GTCTTCGCCG ACAACGGCGA GGCGACGTTC
AGCGATATGA CGATTACCCC TCTCGCTGAT CCACGCGGTG CAAAGCAATA G
 
Protein sequence
MLARQTPLHG DHSRQNQCPN SFGHYTSDKS IYDSAQRAGL IVRGSANGDV GTWIFYDTAS 
QTLTLDRSRS GNIRFSNAFS KQHIVNMPLE NGKLRLTVLV DRNSVEVFMG DGRTVITDLI
FPAPDDNRVS VFADNGEATF SDMTITPLAD PRGAKQ