Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6109 |
Symbol | |
ID | 4315013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 669413 |
End bp | 670042 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638153953 |
Product | TetR family transcriptional regulator |
Protein accession | YP_777987 |
Protein GI | 115360850 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0617571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.147608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATCG CCATAGAACC ATCAAGCGAA ACGTGCTATG TTCTCGGCAT GCCACGTAAG ACTGACGCCC GCGCTCGCGC GATTGCCACG GCCCAACGAC TGTTTCGCAT CCAGGGCTAC ACTGCGACGG GATTGACCCA GATCCTTGAA GAAAGCGGTG CGCCTAAAGG ATCGTTCTAC TTCCACTTTC CGCGCGGCAA GGCACAACTC GCAGAAGAAG CAATCGATAG TTACATTGCG GATCGAATCG CTGTATTACG AGACATCTCG GCGAGTACGA CGGGTGACGC CCTGAATTTT GTTCATCAGA TTTTCAGGAC ATTCGCGGCT GAAATGGTCG CCTCTGATTT CCAGTATGGA TGTCTGATGC AGAATCTGGC GAATGAGCTG CCCGCGCTCG ACGCCGAGCT CACCCAACGG GTAGCGCGCG GATTTGTTGA GTCCACCGAA ATTATTGCGG AGCACTTTAG AGCGTGCGGT TTCGCTCCCT CGCGCGCTTC CTCCACCGCC GCTGCATTGG TAGCCGCGCT CGAAGGCGCG CGGACGATTG CCCGCCTGGA ACGCACGCCC GCTATATTCG AGGCGCTGGC GCTGGTGAGT GTCCAAAGGT GCGCTGATCC CGAAAGGTAA
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Protein sequence | MSIAIEPSSE TCYVLGMPRK TDARARAIAT AQRLFRIQGY TATGLTQILE ESGAPKGSFY FHFPRGKAQL AEEAIDSYIA DRIAVLRDIS ASTTGDALNF VHQIFRTFAA EMVASDFQYG CLMQNLANEL PALDAELTQR VARGFVESTE IIAEHFRACG FAPSRASSTA AALVAALEGA RTIARLERTP AIFEALALVS VQRCADPER
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