Gene Bamb_6098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6098 
Symbol 
ID4315002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp657954 
End bp659141 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content69% 
IMG OID638153942 
Producthypothetical protein 
Protein accessionYP_777976 
Protein GI115360839 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCGA ATCCTTTTCG CCTTCGTCGC GCCCGTCTGC TCGCCGCGCT GACGCTTGCC 
ACCACCGCCG TCGCCGCGCA CGCGGCCGAC TGGATCGTGT CCGGCAACGA CGGCAAGTAC
CAGCGCGTCG AAGGCCGCGA CACCTTTCTC GCATCGCCGC CTGCCGACAC GCTGACGCTG
CTCGATGCCA GCGTGTTCCC GCCGAAGATC GCGCTGCAGG TCGACGTCGA GAACGGCATC
CAGGGGCCGC CGCAGGCCGT CGCGATCACG CCCGACGCGA AACTCGCGCT GGTCGGCGCG
CCGACGCGTT ACGACACGAG CGCGAAGCAA CTCGTGTACG ACACGTTCCT GCAGGTCGTG
AATCTCGAGG CGTCGCCGGC GGCGATCACG CGCATCGAAC TCGGCACGCA CCCGCAGGGG
ATCGCGATCG ACCGGTCCGG TCGCGTCGCG CTGGTGGCGA ACGTCGACGG CAGCGTGTCG
ATCCTGGGGA TCGACGGCAC GCAGGTGACG CTCGACGGCA ACCTGAAGAT CGGCAAGAAG
CGGCTCGCCG GGATCAGCTT CACGCACGAC GGCAAGCATG CGCTCGTGTC GCTGCGCGAC
GAGCAGGGTG TCGCGGTGCT GAACGTCGAC GACGGCAAGG TGACCGACAG CGGCGCGCGG
CTGAGCACGG GCGTTGCGCC TTACACGATC GACGTGTCGA GCGACAACCG CTGGGCCGTC
GTCAGCAACG TCGGGCTCGC GGGGCTGCCG GGCTATACGG GCACGCTCGC GGGCGATGCC
GATTCGGTCG CGCTGATCGA CGTGTCGCGC ACGCCGTTCC GCACGGTCCA GTACCTGAAC
GTGCCGTCGC TGCCGGAAGG CGTCGCGATC TCGCCGAACG GGAAGTGGAT CGCCGTGCAG
GCGATGGACG GCTCGAACCT CACGGCCAAC AACCCGGGCC GCCACAAGCT CGGCAAGGTC
GTGCTGTTCG AGATCCGCAA CGGCCGCGCG GTGCAGACGA GTGAAGTGCC GGGCGGCGAA
GCCGCGCAGG GCATCGTATT CACCGCTGAC AGCCGGCACG TGATCGTGCA GTTCAACGTC
GAGCGGCAGC TTGCGCTGTA TGCGGTGGAA GGTGGCCAGC TGCGCGATAC GGGCAAGCGG
ATCGCGCTGT CGGGCGGGCC GTCGTCGCTG CGGACGTTGC CTCGCTGA
 
Protein sequence
MHSNPFRLRR ARLLAALTLA TTAVAAHAAD WIVSGNDGKY QRVEGRDTFL ASPPADTLTL 
LDASVFPPKI ALQVDVENGI QGPPQAVAIT PDAKLALVGA PTRYDTSAKQ LVYDTFLQVV
NLEASPAAIT RIELGTHPQG IAIDRSGRVA LVANVDGSVS ILGIDGTQVT LDGNLKIGKK
RLAGISFTHD GKHALVSLRD EQGVAVLNVD DGKVTDSGAR LSTGVAPYTI DVSSDNRWAV
VSNVGLAGLP GYTGTLAGDA DSVALIDVSR TPFRTVQYLN VPSLPEGVAI SPNGKWIAVQ
AMDGSNLTAN NPGRHKLGKV VLFEIRNGRA VQTSEVPGGE AAQGIVFTAD SRHVIVQFNV
ERQLALYAVE GGQLRDTGKR IALSGGPSSL RTLPR