Gene Bamb_6080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6080 
Symbol 
ID4314984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp640361 
End bp641386 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content66% 
IMG OID638153924 
Producthypothetical protein 
Protein accessionYP_777958 
Protein GI115360821 
COG category[S] Function unknown 
COG ID[COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.308091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGCC GGCATGCGCG GCGCGCGAAC CTGCGATCCG CGATGATATT GGCAGTACTG 
ACGATAGCGC CGATGGCCGC GCACGCGGCC GGTTTCGACT GCGCGAAAGC CGCTTCGCCG
ACCGAGAAGG CGATCTGCGC AGATCCCGCG CTGTCATCGC TCGACGGCCA GCTGGCCGGG
GCATGGAAGA AGGCGCTCGC GAAAGGCGGC GATACGGCCG CGCTGAAGGC CGCGCAGTTG
CAATGGCTGA AGCAACGCGA CCGCTGCGGC GCCGGCGTGT TGTGCGTCGG CGATCGCTAT
CGCGAGCGGC TCGCGAGCCT GAACGGTGCG CCGCTTGCAG CCGACCGGTG GCAGCAGACG
TGGTATCGCG ACAGCGACAC CCCGTCGTTC GGCGGCGTGC TGACGTTCAC CGGCACGGCG
CCGCGCCTGC ACTTCGAACT GAGCGGCAAC AACGGTGGGA ATACGGGCGG GCTCAGCGGC
GATATCGAAC TGCACGGCGA CCGCGGCACG TTTCGCCAGG ATCAATGCCG GCTCGATTTC
AGCCGCAACG GTGGACGCAT GCAGGTCGCA CAGCAGGGCA GCGATGTCGA TTGCGGCGCC
GGTTCGGGCG TCACGTATTC GGGCGATTAC GTGACGGCAT CGAAGGCGCA GGCGCGTCCG
CCGGCGGATC TCGTGACCCT GAAGGTGCTG ACCGACGCGC GGCAGAACGC GGTCGCGCAC
AAGCTGCTCG GCGCCGACTA TCAGACGCTC GTCGACATGA TCAACGTCAG CGCGGACGAG
AAGGATCTCG ACGGCCTGAA CGCCAACGTG ACGTCGTACT GGGTGCGTGG CATCGCGACG
ACGAACGCCG CGATCGTGAT GCAACGGGGT ACCGATCTGT GGATCGGGCT ACTCGTGTTC
GACGCGCATG ACAAGGTGCG GATGCGCTAC TACTCGAACG TGCCGGCGTG GAAAAAGACG
GTGCCGAAGA CCATTCGTGC GTGGCACGAC AAGCTCGACA AGACGCTGCC GATCGACCTC
ATGTGA
 
Protein sequence
MHGRHARRAN LRSAMILAVL TIAPMAAHAA GFDCAKAASP TEKAICADPA LSSLDGQLAG 
AWKKALAKGG DTAALKAAQL QWLKQRDRCG AGVLCVGDRY RERLASLNGA PLAADRWQQT
WYRDSDTPSF GGVLTFTGTA PRLHFELSGN NGGNTGGLSG DIELHGDRGT FRQDQCRLDF
SRNGGRMQVA QQGSDVDCGA GSGVTYSGDY VTASKAQARP PADLVTLKVL TDARQNAVAH
KLLGADYQTL VDMINVSADE KDLDGLNANV TSYWVRGIAT TNAAIVMQRG TDLWIGLLVF
DAHDKVRMRY YSNVPAWKKT VPKTIRAWHD KLDKTLPIDL M