| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6068 |
|---|
| Symbol | |
|---|
| ID | 4314972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 628391 |
|---|
| End bp | 629323 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638153912 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_777946 |
|---|
| Protein GI | 115360809 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.979336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCG CGAATCGCCT GTTGTCCGCC TGTGTGCTGG GCGTGGGCTT CCTGTTCCTG
TACGTGCCGA TCGCGAGCCT CGTCGTCTAT TCGTTCAACG CGTCGAAGCT CGTGACGGTG
TGGTCCGGCT TCTCGTTTCG CTGGTACGGC GTGCTACTGC ACGACGGCGA ACTGCTGACG
GCCGCGTGGC TGTCGCTGAA GATCGCGGTG CTGACGGCGA CCGCGTCGGT CGCGATCGGC
ACCTGGGCCG GCTTCGTGCT GGCCCGCATG GGGCGCTTTC GCGGCTTCAC GCTCTATGCG
GCAATGATCA ACGCGCCACT GGTGATTCCC GAAGTGATCC AGGGCATCTC GCTGCTGCTG
CTGTTCGTCG CGATGCAGCA GACCTTCGGC TGGCCTGCCG GGCGCGGCTG GCTGACGATC
TGGATCGGCC ACGTGATGCT GTGCCTGTCG TTCGTCGCGG TGATCGTGCA GTCGCGCGTG
AAGGAGCTCG ATCGCTCGAT CGAGGAAGCC GCGCTCGACC TCGGTGCCCG GCCGTTGAAG
GTGTTCTTCG TGATCACGCT GCCGCTGATC GCGCAGGCGC TGGTGTCCGG CTGGCTGCTC
GCGTTCACCG TGTCGATCGA CGACGTCATT CTTTCTGCCT TCCTGTCGGG CCCCGGTTCG
ACGACGCTGC CGCTCGTCGT GTTCTCGCGC GTGCGGCTCG GCTTGAACCC GGAGATGAAC
GCGCTCGCGA CGGTGTTCAT CACGGTCGTG ACGATCGGCG TCGTCGTCGT GAACCGCTCG
ATGCTGGCCC GCGAGCGACG GCAAGCCCGC GACGCCCGTG CGTGGCACGC GGCCTGCGCG
CCGGACGCAC CGTCTGCACC GACGGTCTCG CCGCCCGCTC GCGCGTCGGC CGTGCACGCG
CGCCGCGACC CCGCACCGCA TCCCGTGAAG TGA
|
|---|
| Protein sequence | MTRANRLLSA CVLGVGFLFL YVPIASLVVY SFNASKLVTV WSGFSFRWYG VLLHDGELLT
AAWLSLKIAV LTATASVAIG TWAGFVLARM GRFRGFTLYA AMINAPLVIP EVIQGISLLL
LFVAMQQTFG WPAGRGWLTI WIGHVMLCLS FVAVIVQSRV KELDRSIEEA ALDLGARPLK
VFFVITLPLI AQALVSGWLL AFTVSIDDVI LSAFLSGPGS TTLPLVVFSR VRLGLNPEMN
ALATVFITVV TIGVVVVNRS MLARERRQAR DARAWHAACA PDAPSAPTVS PPARASAVHA
RRDPAPHPVK
|
|---|
| |