Gene Bamb_6056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6056 
Symbol 
ID4314960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp615668 
End bp616522 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content69% 
IMG OID638153900 
Productthioesterase 
Protein accessionYP_777934 
Protein GI115360797 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGCG CTTGCTCGAC CGATGAACCC GACCTCCCGA CCACGACACT CATGACCCCC 
ACCGCAGCGT TGAAAGTCTT CATGCCGGTC CGCGCGCCGC GTATCCGGCT CGTGTGCTGC
TCGTACGCCG GCGGCAACGC TTCCGCGTAC GCCCATTGGC ATGCCGGGTT GCCGGACGAC
GTCGAAGTGT GCGCGGTCGA ACTACCCGGG CGCGGCGCGC GGTTCCGCGA GCCGCCGTTG
CGCACGATGG GCGCGCTCGC CGACCATGTC ATGGCAAGCC TGCTGCCACT CGCCGACGCG
GGCATCGTGC TGTTCGGACA CAGCATGGGC GGCGCGCTGG CGCTCGAGCT GGCGAGCCGG
CTCGTCGACG TCGGCATGCC GCCGTCGGCG CTGGCCGTGT CCGGATGCGC GGCGCCGCAT
CTGCCGTCGC GACGTCGGCG CCGGCTGCAC GATCTGCCCC GCGACGAACT GGTGCAGGAA
CTGAATCTGC TGGAAGGGCT GCCCGCGGGG ATGCTGGATG CGGATGCCTT CATCGATCTG
TTCCTGCCGA CGATCCGTGC GGACCTCGAG TGCCGGGAAA CCTGGCGTGC GGCGATTCGC
GCGGTGCCGG TGCCGGTCCA TGTGCTCGCC GGTGCCGACG ATGCGCTGGT CGCACTCGAC
GATCTGGGCG AATGGCAACG GTATTCGTCG TTGCCGATCC GAGTGCGGGT GTTCGGCGGC
GAGCATTTCT TTATTGACTC GCATCGCGCC GAGGTGCTTG CGCATCTGCG CGAAATCCTC
GGCGAGCCGC CGGCGCCGGC CGGCGGTGGT GCGGTGAAGC GGGCATCTGC ATCAACCGCC
GAACGGATTG CCTAG
 
Protein sequence
MAGACSTDEP DLPTTTLMTP TAALKVFMPV RAPRIRLVCC SYAGGNASAY AHWHAGLPDD 
VEVCAVELPG RGARFREPPL RTMGALADHV MASLLPLADA GIVLFGHSMG GALALELASR
LVDVGMPPSA LAVSGCAAPH LPSRRRRRLH DLPRDELVQE LNLLEGLPAG MLDADAFIDL
FLPTIRADLE CRETWRAAIR AVPVPVHVLA GADDALVALD DLGEWQRYSS LPIRVRVFGG
EHFFIDSHRA EVLAHLREIL GEPPAPAGGG AVKRASASTA ERIA