Gene Bamb_6051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6051 
Symbol 
ID4314955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp610986 
End bp612488 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content68% 
IMG OID638153895 
Productamino acid adenylation domain-containing protein 
Protein accessionYP_777929 
Protein GI115360792 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1020] Non-ribosomal peptide synthetase modules and related proteins 
TIGRFAM ID[TIGR01733] amino acid adenylation domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0828298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATT CGACCATCGA CGGCCGCTTC GCCGAGCAGG TGCGCCGCAC GCCGGAGCGC 
ATCGCACTGG AGGGAACGGC GCACGTGCCG CCGCTCACCT ACCGCGAACT CGACCGCTGC
GCGAACCGGC TTGCCGCGGT GCTTGCGCGG CACGGCGTCA CGCAGGGCGC GCCCGTGCTG
CTGATGCTGC CGCGCTGCTC GAACGCCGTG ATCGCGATGC TGGCGATCGT CAAGCTCGGC
GCGATCTTCG TCCCGCTCGA TCCGAACTAC CCCGCTGCGG TCAAGCACGC GTATGCACGT
GACAGTGCGG CGCGGCACGC GATCGCGGCC GCAGGCGACG ACACGCTGCG CGAGTCGGGA
CTGTCGGTGA TCCACATCGC CGATCTCGCG AACGACAGAT CGGCCGACGC TCCGCCGCCC
GCCGCGTCGC ACGGAGCCGA CGCGCCGGCC TACGTGATGT TTACGTCGGG AAGCACCGGC
AAGCCGAAAG GCGTCGTGGT GCCGCATCGC GGTGTCGTGC GGCTCGTCGA CCGGCCGAAC
TACATCGCGA TCCAGCCGGA CGATGCCTTC CTGCTGCTGT CCCCGATCAC CTTCGACGCG
TCGACGTTCG AGATCTGGGG CGCGTTGCTG AACGGCGCGC GCCTCGTGGT GTACGACGGC
GCCATCTTCG ATCCCAATGC CGTTTCGCAG CTGATTCGCG AACAGCGCGT GAGCGTGATG
TGGCTGACCG CCGCGCTGTT TCATCTCGTC GTGCGCCGCT ATCCGGCCAT GCTGACCGGC
GTGCGTGTGC TGCTGGCGGG CGGCGACGTG CTGCATCCGG ACGCGGTCAA TGCCGCGCTC
GATGCGTTCC CGGGCATCAC CGTCGTCAAC GGATACGGCC CGACCGAAAA CACGACGTTT
ACGTGCTGCC ACGTGATGAC GCGCGACAAC CGGCCCGACG GCGTCGTACC GATCGGCACG
CCCGTGACCG GCACGTCGGT GCATGTCGTG CGCGGCGACG GCGATCTCGC GTCGGTTCCG
GACGGGCAGG AAGGCGAGCT CTACGCCGGC GGCGACGGCG TCGCGCTCGG CTATCTGAAC
CAACCCGACG CGACCCGCGC GGCCTTCGTG CCGGATCCGG CCGGGCCCGG CCGGCTGTAC
CGCACCGGCG ACATCGTCCG GCGCCGCGCG GACGGCACGC TCGAATTCGT CGGTCGTCGC
GACCGGCTCA CGAAGATCCG CGGCTACCGC GTGAGCCTCG ACGAGGTGCA GCAAATCGTC
GCGCGCTTGC CGTGCGTGGA GGAATGCGTC GTCCAGGTTC GCGAAGATCC GAACGGCGAA
AAGTTGCTGG TCGCCACGGT TCAGACCAAC GAACAGCGCG ACAACATGCC TGCGTTCATT
CGCGGCGAAC TGCGCAAGCT GGTGCCTGGT TTCATGATTC CCGACGCCAT CGCCGTGTGC
GCCGAACTAC CGGTCAACGC GAACGGCAAG GTCGATCGGG TTCGACTCGC AAGTCCCATC
TGA
 
Protein sequence
MNHSTIDGRF AEQVRRTPER IALEGTAHVP PLTYRELDRC ANRLAAVLAR HGVTQGAPVL 
LMLPRCSNAV IAMLAIVKLG AIFVPLDPNY PAAVKHAYAR DSAARHAIAA AGDDTLRESG
LSVIHIADLA NDRSADAPPP AASHGADAPA YVMFTSGSTG KPKGVVVPHR GVVRLVDRPN
YIAIQPDDAF LLLSPITFDA STFEIWGALL NGARLVVYDG AIFDPNAVSQ LIREQRVSVM
WLTAALFHLV VRRYPAMLTG VRVLLAGGDV LHPDAVNAAL DAFPGITVVN GYGPTENTTF
TCCHVMTRDN RPDGVVPIGT PVTGTSVHVV RGDGDLASVP DGQEGELYAG GDGVALGYLN
QPDATRAAFV PDPAGPGRLY RTGDIVRRRA DGTLEFVGRR DRLTKIRGYR VSLDEVQQIV
ARLPCVEECV VQVREDPNGE KLLVATVQTN EQRDNMPAFI RGELRKLVPG FMIPDAIAVC
AELPVNANGK VDRVRLASPI