Gene Bamb_6049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6049 
Symbol 
ID4314953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp609716 
End bp610642 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content63% 
IMG OID638153893 
Productchlorinating enzyme 
Protein accessionYP_777927 
Protein GI115360790 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID[TIGR01762] chlorinating enzymes 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00398666 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACT TTCGACTGAC GCCCGAGGAA ATCGCCACTT TTCGCGCGCA AGGCTACATC 
GGCCCGTTCA CGCTGTATTC GCCCGAGGAA GCGCGCGAGC GCTACAGGAC GATCCGCGCG
CAGCTGTTCG ATCGTGAATA CGCGGTGTAC GACCTGCCGC CGACGAGCCC GATCGCCAAT
TACGATCGCC ACCTCGACGT CAATCTGCTG AGCGAGCATA TCGGCCGGCA GGAAATCGTC
CAGCGGCTGA ACTCGATTCT CGGGCCCGAC GTCATCTGCT GGCGTTCGGA GATGTTCCCG
AAGTATCCGG GTGACGAAGG GACCGACTGG CACCAGGCCG ATACGTTCGC GCATGCGTCG
GGCCAGCCGC AGATCGTGTG GCCGGGCGAT CAGCGTTTCG GCGGCGCGAT CACGGTATGG
ACGGCGCTGA CCGACGCGAC CGAGCAAAAC GGCTGTCTGC GCTTCGTGCC GGGCACGCAT
GAAGAGATGT TCTACGACGA GTCGCGGAAG ATGCAGTTCG ATCCGTCCAA CATCAATGCC
CTCGAGAAGG ACGGCATCAA GCGCGGCTTC TTCGGCTACG ACTATCGCAG CCTGCAGAAG
GATCCGGACT GGAAGCCGGA CGAGAGCAAG GCCGTGTCGA TCGTGATGAA GCCCGGCCAG
TTCGTGATCT TCTGGTCGAC GCTGATGCAC TCGTCGTTTC CGAACTCGAC GGTCGACCAG
ACCCGGCTCG GCTACGCGAG CCGCTACGTG CCGGCCGCGG TCAAGGTCTA TCCGGACACC
GACACCGTCG ACGAATACGG CAGCAAGATC TCGCTCGACA AGTTCGGCGT CGTGCTCGTC
TCCGGCGAGG ATCGATTCGG GCATAACCGC CGCGTCGAGC GCAACGCGCG CGGCGTCAGC
TTCGCGCAGC AACCGTCCTA CGCCTGA
 
Protein sequence
MQNFRLTPEE IATFRAQGYI GPFTLYSPEE ARERYRTIRA QLFDREYAVY DLPPTSPIAN 
YDRHLDVNLL SEHIGRQEIV QRLNSILGPD VICWRSEMFP KYPGDEGTDW HQADTFAHAS
GQPQIVWPGD QRFGGAITVW TALTDATEQN GCLRFVPGTH EEMFYDESRK MQFDPSNINA
LEKDGIKRGF FGYDYRSLQK DPDWKPDESK AVSIVMKPGQ FVIFWSTLMH SSFPNSTVDQ
TRLGYASRYV PAAVKVYPDT DTVDEYGSKI SLDKFGVVLV SGEDRFGHNR RVERNARGVS
FAQQPSYA