Gene Bamb_6043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6043 
Symbol 
ID4314947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp603970 
End bp605214 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content67% 
IMG OID638153887 
Productsodium/hydrogen exchanger 
Protein accessionYP_777921 
Protein GI115360784 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCT GGTTGCTGCA ACTCATGCTC GTGATCGCGT GTTGCAACGT CTGCGGCCGT 
CTTGCCGAGC GGCTCGGCCA ATGTGCGGTC GTCGGCGAAA TCGCGGCCGG ACTCTTGCTC
GGCCCTTCGC TGTTCGGTAC GATCGCACCG GATTTCTACG ATGTGCTGTT CGGCCCGCGC
GCGCCGTCGG CGATGGCGCA GGTCGGGGAG ATCGGCCTGG TGTTGCTGAT GTTCCAGCTC
GGGCTGCACA TGGAATTCGG CGTCACGTTG CGCGGCGGCC GGTGGCGCGT GCCCGTCGCC
GTCGCGATCG GCGGCTTGTG CATACCGGCC GCGATCGGCA TGGTCATCGC GGTCGTGTCG
AAGGACACGC TTGCGATCGA CGCACCGTGG CTGCCGTACG TGCTCTTCTG CGGTGTCGCG
CTCGCGGTGT CGGCCGTGCC GGTCATGGCG CGCATCGTCG ACGATCTGAG GCTCGGCGCG
ATGAGCGGCG CGCGGCACGC GATGTCTGCG GCGATGCTGA CGGATGCGCT CGGCTGGATG
TTGCTGGCGA CGATCGCGTC GCTGTCGAAC GGTCCTGGTT GGGCCTTCGC GCGCATGCTC
GCCAGCTTGC TCGTGTTTCT GGCGATCAGT GCGTTGCTGG CGCGCTTCGT CGTGCGCCCG
CTGCTCATGC GGTTGGCACA AACGGCGCAC GCGACGCGCG ACCGGCTGGC GGTGTTGTTC
TGCTTCGTGC TGGCGTCGGC GGTCGCAACG TCGCTGATCG GTTTCCATAG CGCGTTCGGC
GCGCTGTCGG CGGCGCTGTT CGTGCGTCGC GTGCCGGGGC TGGACGTCGA GTGGCGCGAG
AATGTCGAGG GCTTCGTGAA GCTCGTGCTG ATGCCGGTGT TCTTCGCGTA CGCCGGGTTG
CACGCGTCGA TCGGGATGAT CGACGATGCG TCGTCATGGA TGTGGTTCGG CGTGTTTCTC
GCCGGCGGGT TCGCGGGCAA GTTCGGCGGC AGCTACGTCG GTGCGCGCGT GACGGGGCTT
GCGCCGCGCG ATGCGATGCT GGTCGGCTCG TTGATGAATA CGCGCGGCTT GATGGAACTG
ATCGTGCTGT CGATCGGGCT GCAGATGCAG ATTCTTCCGA CCCGCGTCTA TACGATCCTC
GTCATATTCG CGCTGGTGAC GACGGCGCTG ACCGCGCCGC TCGTGCGACT CACGCTGCGC
GCGCATTCGC GCTCGGCCCC TGCGATGCAG ATCGTCGGCG AGTGA
 
Protein sequence
MTIWLLQLML VIACCNVCGR LAERLGQCAV VGEIAAGLLL GPSLFGTIAP DFYDVLFGPR 
APSAMAQVGE IGLVLLMFQL GLHMEFGVTL RGGRWRVPVA VAIGGLCIPA AIGMVIAVVS
KDTLAIDAPW LPYVLFCGVA LAVSAVPVMA RIVDDLRLGA MSGARHAMSA AMLTDALGWM
LLATIASLSN GPGWAFARML ASLLVFLAIS ALLARFVVRP LLMRLAQTAH ATRDRLAVLF
CFVLASAVAT SLIGFHSAFG ALSAALFVRR VPGLDVEWRE NVEGFVKLVL MPVFFAYAGL
HASIGMIDDA SSWMWFGVFL AGGFAGKFGG SYVGARVTGL APRDAMLVGS LMNTRGLMEL
IVLSIGLQMQ ILPTRVYTIL VIFALVTTAL TAPLVRLTLR AHSRSAPAMQ IVGE