| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6033 |
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| Symbol | |
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| ID | 4314937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 591423 |
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| End bp | 592553 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153877 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_777911 |
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| Protein GI | 115360774 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.516137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCC TGTTTGCAAC GCCGCGTCCG GTCAATCTTC GCATCGTCAC CGCTCAGCCG
GACGAATCGC GCACACGCTC GCGCGGCGCG CCCATTCTCA CTGGCTCGGC GCATCAAGCG
ACGGATCGCA CCCGTGCACA CGTGTTCGTC GATCCGCGTT CGCTCGCGCT GCTTGAACGC
GTGCGGCGCG TCGCGCCGAG CGACGCGAAC GTGCTGATCG CCGGCGAGAC CGGCACGGGC
AAGGAATTGA TCGCGCGCCG CGTGCACGAC GTCAGCCATC GCGGCGACGG ACCGTTCGTT
GCCGTGAACT GCGGCGCGCT GTCCGACACG CTCGTCGACA GCGAACTGTT CGGTCACGAG
AAAGGCGCAT TCACGGGCGC GGTCGGCGCG AAGCCCGGCT GGTTCGAAGC CGCGAACGGC
GGCACGCTGT TTCTCGACGA GATCGGCGAC CTGCCGCTGC CGATGCAGGT CAAGCTGCTG
CGCGTACTGC AGGAGCGCGA GGTCGTACGG CTCGGCTCGC GCGCGAGCAT CCCGATCGAC
GTGCGCGTGG TGGCCGCGAC CAACGTCGAC CTGGAGCAGG CGGTGGCGGC CGGACGGTTT
CGCGGCGACC TGTTCTACCG GCTCAATGTC GTGCGGCTCG ACGTGCCGAC GTTGCGCGAA
CGTCCCGGCG ACATCCTGCC GCTCGCGCGC CACTTCCTGG ACACATACCG CGGCCGCCTC
GGCCACGGGC CGCGCAGCAT CGATCCGCGC GCGGCGCGCC GGCTCGAAGC GCATCCGTGG
CCCGGCAACA TCCGCGAACT GGAGAACGTG ATGCATCATG CGGTGCTCGT GAGCCGCCAC
GATGCGTTGC AGGACACCGA CCTGAACCTG TCGTCGGCAT GCGCACCGGT CACGGGCGCG
CGGGAAGCGG CGAGCCACGC GCCCGCTCAG GAGGCGCTCG AACTGGCGCT GTGCGCGCTG
TTCGACGACG CGCACGAGAA CCTGTTCGAG CGTATCGAGG ACACCGTGAT GCGCGTAGCG
TTCGACTTCA GCCACCGCAA CCAGATCCAG GCCGCGCGAC TGCTCGGCAT CAGCCGCAAT
GTGCTGCGCG CGCGGCTGAT TCGCGCGAAG GTGATCGCGG CCGTCAAGTA A
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| Protein sequence | MTSLFATPRP VNLRIVTAQP DESRTRSRGA PILTGSAHQA TDRTRAHVFV DPRSLALLER
VRRVAPSDAN VLIAGETGTG KELIARRVHD VSHRGDGPFV AVNCGALSDT LVDSELFGHE
KGAFTGAVGA KPGWFEAANG GTLFLDEIGD LPLPMQVKLL RVLQEREVVR LGSRASIPID
VRVVAATNVD LEQAVAAGRF RGDLFYRLNV VRLDVPTLRE RPGDILPLAR HFLDTYRGRL
GHGPRSIDPR AARRLEAHPW PGNIRELENV MHHAVLVSRH DALQDTDLNL SSACAPVTGA
REAASHAPAQ EALELALCAL FDDAHENLFE RIEDTVMRVA FDFSHRNQIQ AARLLGISRN
VLRARLIRAK VIAAVK
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