| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6031 |
|---|
| Symbol | |
|---|
| ID | 4314935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 587714 |
|---|
| End bp | 589099 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638153875 |
|---|
| Product | general substrate transporter |
|---|
| Protein accession | YP_777909 |
|---|
| Protein GI | 115360772 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATACG TGCCATCGTG GACTTCCGTT TCCCCCGCCG CGTCCGTCCC GGACGAGACG
GCTTCCCGCG GCGACGAGCC GCACTGCCTG CCGCGGGTCG CGATCGCGGC CGCCGCCCTC
GGCAACGCGA CCGAATGGTT CGATTACGGC ATTTACGCGT ACGGGCTCGC CTACATCTCC
GCGGCGCTGT TTCCCGGCAA CACGGCCAGT GCGACGTTGT TCGCGCTCGG CACCTTCGCC
ATCTCGTTCC TGATCCGCCC GCTCGGCGGC CTGTTCTGGG GCCCGCTCGG CGACCGCCTC
GGCCGCAAGC GGGTGCTCGC GCTGACCGTG CTCACGATGT CGGGTGCAAC CCTGCTGGTC
GGCTTGCTGC CGACCTACGC GACGGCCGGC TGGCTCGCGC CGGCGGCACT CATCGTGCTG
CGCATGGTGC AGGGCTTCTC GACCGGCGGC GAATACGGCG GCGCGGCGAC CTTCATTGCC
GAATACGCAC CGGATTCGCG CCGCGGCCTG TGCGGCAGCT TCCTCGAATT CGCGACGATT
GCCGGGTTCT CGCTCGGCGC GCTGCTGATG CTCGGCTTCG CGCTGCTGCT CGGCGACTCG
TCGATGCACG CATGGGGCTG GCGCCTGCCA TTCCTCGTCG CGGCCCCGCT CGGGCTGATC
GGCTTCTACC TGCGTTCGCG CCTCGAGGAA ACGCCGGTGT TCCGCGAGCT CGAGGAGCAG
GCGCAGCGGC GCGAGCAGAG CACCGCCGCC ACCGCGCTGC CGGTCGGCCA GCTGCTGGTG
CGCTATGCGC GGCCGCTGCT GCTGCTCGGC GGGCTCGTCG TCGCGTTGAA CGTCGTCAAC
TACGTACTGC TCGCGTACAT GCCGACCTAC ATGCACAAGG AACTCGGTGT CAGCGAGAAC
ATGTCGCTGC TGATTCCGCT GATCGGCATG CTCGCGATGA TGGTGCTGCT GCCGTTCGCC
GGCTGGCTGT CGGATCGCGT CGGCCGCAAG ACGATGTGGT GGATCTCGCT CGTCGGGCTG
TTCGTCGCGG CCGTGCCGAT GTTCACGCTG ATGACGCACG GCGTGCTCGG CGCATTCATC
GGCTTCGCGG TGCTCGGCCT GCTGTACGTA CCGCAGCTCG CGACCATTTC CGCGATGTTC
CCGGCGATGT TCCCGACCCA CGTGCGGTAT GCGGGCATGG CGATCGCATA CAACGTGTCG
ACGTCGCTGT TCGGCGGCAC CGCGCCGATC GTCAACGACT GGCTGATCGG CAAGACCGGC
AATACGATGA TTCCCGCGTA CTACATGATG GCGGCCTGTG CGGTCGGGCT GGTTGCGCTG
GCGGGCGTGA TCGAGACGCG CGGGTGTTCG CTGCGCGGGG ACACGGTGCC GGGGCGAGCG
GGCTGA
|
|---|
| Protein sequence | MRYVPSWTSV SPAASVPDET ASRGDEPHCL PRVAIAAAAL GNATEWFDYG IYAYGLAYIS
AALFPGNTAS ATLFALGTFA ISFLIRPLGG LFWGPLGDRL GRKRVLALTV LTMSGATLLV
GLLPTYATAG WLAPAALIVL RMVQGFSTGG EYGGAATFIA EYAPDSRRGL CGSFLEFATI
AGFSLGALLM LGFALLLGDS SMHAWGWRLP FLVAAPLGLI GFYLRSRLEE TPVFRELEEQ
AQRREQSTAA TALPVGQLLV RYARPLLLLG GLVVALNVVN YVLLAYMPTY MHKELGVSEN
MSLLIPLIGM LAMMVLLPFA GWLSDRVGRK TMWWISLVGL FVAAVPMFTL MTHGVLGAFI
GFAVLGLLYV PQLATISAMF PAMFPTHVRY AGMAIAYNVS TSLFGGTAPI VNDWLIGKTG
NTMIPAYYMM AACAVGLVAL AGVIETRGCS LRGDTVPGRA G
|
|---|
| |