Gene Bamb_6026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6026 
Symbol 
ID4314930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp579999 
End bp581651 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content63% 
IMG OID638153870 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_777904 
Protein GI115360767 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAA CGGCCTATTC TCGTGGGCTC GAGAAGAACG CGGCAAACCA CGTTCCATTG 
ACGCCCCTGA CCTTTCTCGA TCGAACCGCC GACGTCTTTC CGAATCGAAC CGCGATCATT
CATGGCGACT TCCGGCAGAC GTGGGCGAAA ACGCGCGAGC GCTGCTATCG CTTCGCGTCG
GCGCTCGTTC GGTTGGGGAT CGAGCCGGGC GACACGGTGT CGATCATCGC GCCGAACACC
CCGGCCATGC TCGAAGCCCA CTTCGGCGTC CCGCTGTCGG GCGCCGTTCT CAATGCGATC
AATTGCCGCC TCGACGCCGA CGGCATCGCA TTCATTCTGC GCCACGGCGA ATGCAAGCTG
CTGCTCGTGG ATCGCGAACT GGCTCCCCTG GTCGCGAAAG CGTTGCAGTC GGTTCCCCAT
CCGCCACGCG TGATCGACAT CAACGATCAC GAAGCACCCG ACGGCCCGGC CATTGGCGAA
ACCGATTATG AGTCGCTGCT GGCGAGCGGC GATCCGGAAT TTGCCGGCCG CCGCCCGGCC
GACGAGTGGA CGCCGATCGC GTTGAACTAC ACGTCGGGCA CCACCGGGGA TCCGAAAGGC
GTCGTTCCGA GCCATCGCAG CACCTATGTG ATGAGCCTGT TGCAAATGAC GAACTGGCCG
CTCCCGCGTG CGCCGATCTA CCTGTGGACG CTTCCCATGT TCCACGCGAA CGGCTGGTGC
TTCACATGGG CGATTACGTC AGCGGCGGGC ACGCATGTCT GTTTGCGCAA GGTGAATGCC
GCGAATATTC TCTCTGCCAT CGCCAAGCAC GGCGTCGATC ATTTTTGTGC GGCGCCGATT
GTTCTCGCAG GCATCGCGAG CGTGCCGCCG TCTGAGCTGC AGCCGTTGCC TCGTCGTGTG
CGGGTTCTAA CCGCCGGCTC GCCAGCGCCG GCAGCGGTGC TCGAGGCCGT CGGCGCGGTG
GGTTTCGACG TCGACCACGT CTATGGCATT ACCGAAATCG CCGGCACGCC GATCAGCTGT
GCGTGGCACG ACGAGTGGGA TACGTTGCCG TCGGACCAGC AAGGGAAAAT GAAAGCGCGA
CAAGGTGTAC GCGCGGCGGC GTTCGAGAAC ATGTCGGTCG CCGATCTCGC GACGCTCGAA
CCCGTCCCCG CCGATAGCAC GTCTTGCGGC GAAGTGCTGG TCCGCGGGAA TACGGTCATG
ATGGGATACT TCAAGAATGC CGACGCAACG GCAAAAGCGT TCGCCGGCGG CTGGTTCCAC
ACCGGCGATC TTGCGGTCGT GCATCCCGAC GGCTATATCC AGATCACCGA CCGCTCCAAG
GACGTCATCA TCTCGGGTGG AGAAAACATT TCGTCCGTGG AAGTGGAGGA GGTCATTTAT
CGCATGGCAG GCGTGCTCAA CGCGGCCGTG GTCGCTCAGC CGGACGACAA ATGGGGCGAG
ACGCCTTGTG CGTTCATCGA ACTGAAACCG GATGCCTCCC CCATCACCGA GCAGGACGTC
ATCCTGTTCT GCCGCGAGCG ACTGGCGCAT TTCAAATGCC CGCGTCGTGT GATTTTCGGC
GAGTTGCCCA AGACCGCCAC GGGCAAGATC CAGAAGTTCC GCCTTCGGGA GCAAGCGGGC
AGCCAGGCCG CGATCACGAG GTTGGCGGGA TAG
 
Protein sequence
MSATAYSRGL EKNAANHVPL TPLTFLDRTA DVFPNRTAII HGDFRQTWAK TRERCYRFAS 
ALVRLGIEPG DTVSIIAPNT PAMLEAHFGV PLSGAVLNAI NCRLDADGIA FILRHGECKL
LLVDRELAPL VAKALQSVPH PPRVIDINDH EAPDGPAIGE TDYESLLASG DPEFAGRRPA
DEWTPIALNY TSGTTGDPKG VVPSHRSTYV MSLLQMTNWP LPRAPIYLWT LPMFHANGWC
FTWAITSAAG THVCLRKVNA ANILSAIAKH GVDHFCAAPI VLAGIASVPP SELQPLPRRV
RVLTAGSPAP AAVLEAVGAV GFDVDHVYGI TEIAGTPISC AWHDEWDTLP SDQQGKMKAR
QGVRAAAFEN MSVADLATLE PVPADSTSCG EVLVRGNTVM MGYFKNADAT AKAFAGGWFH
TGDLAVVHPD GYIQITDRSK DVIISGGENI SSVEVEEVIY RMAGVLNAAV VAQPDDKWGE
TPCAFIELKP DASPITEQDV ILFCRERLAH FKCPRRVIFG ELPKTATGKI QKFRLREQAG
SQAAITRLAG