Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6026 |
Symbol | |
ID | 4314930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 579999 |
End bp | 581651 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638153870 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_777904 |
Protein GI | 115360767 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCAA CGGCCTATTC TCGTGGGCTC GAGAAGAACG CGGCAAACCA CGTTCCATTG ACGCCCCTGA CCTTTCTCGA TCGAACCGCC GACGTCTTTC CGAATCGAAC CGCGATCATT CATGGCGACT TCCGGCAGAC GTGGGCGAAA ACGCGCGAGC GCTGCTATCG CTTCGCGTCG GCGCTCGTTC GGTTGGGGAT CGAGCCGGGC GACACGGTGT CGATCATCGC GCCGAACACC CCGGCCATGC TCGAAGCCCA CTTCGGCGTC CCGCTGTCGG GCGCCGTTCT CAATGCGATC AATTGCCGCC TCGACGCCGA CGGCATCGCA TTCATTCTGC GCCACGGCGA ATGCAAGCTG CTGCTCGTGG ATCGCGAACT GGCTCCCCTG GTCGCGAAAG CGTTGCAGTC GGTTCCCCAT CCGCCACGCG TGATCGACAT CAACGATCAC GAAGCACCCG ACGGCCCGGC CATTGGCGAA ACCGATTATG AGTCGCTGCT GGCGAGCGGC GATCCGGAAT TTGCCGGCCG CCGCCCGGCC GACGAGTGGA CGCCGATCGC GTTGAACTAC ACGTCGGGCA CCACCGGGGA TCCGAAAGGC GTCGTTCCGA GCCATCGCAG CACCTATGTG ATGAGCCTGT TGCAAATGAC GAACTGGCCG CTCCCGCGTG CGCCGATCTA CCTGTGGACG CTTCCCATGT TCCACGCGAA CGGCTGGTGC TTCACATGGG CGATTACGTC AGCGGCGGGC ACGCATGTCT GTTTGCGCAA GGTGAATGCC GCGAATATTC TCTCTGCCAT CGCCAAGCAC GGCGTCGATC ATTTTTGTGC GGCGCCGATT GTTCTCGCAG GCATCGCGAG CGTGCCGCCG TCTGAGCTGC AGCCGTTGCC TCGTCGTGTG CGGGTTCTAA CCGCCGGCTC GCCAGCGCCG GCAGCGGTGC TCGAGGCCGT CGGCGCGGTG GGTTTCGACG TCGACCACGT CTATGGCATT ACCGAAATCG CCGGCACGCC GATCAGCTGT GCGTGGCACG ACGAGTGGGA TACGTTGCCG TCGGACCAGC AAGGGAAAAT GAAAGCGCGA CAAGGTGTAC GCGCGGCGGC GTTCGAGAAC ATGTCGGTCG CCGATCTCGC GACGCTCGAA CCCGTCCCCG CCGATAGCAC GTCTTGCGGC GAAGTGCTGG TCCGCGGGAA TACGGTCATG ATGGGATACT TCAAGAATGC CGACGCAACG GCAAAAGCGT TCGCCGGCGG CTGGTTCCAC ACCGGCGATC TTGCGGTCGT GCATCCCGAC GGCTATATCC AGATCACCGA CCGCTCCAAG GACGTCATCA TCTCGGGTGG AGAAAACATT TCGTCCGTGG AAGTGGAGGA GGTCATTTAT CGCATGGCAG GCGTGCTCAA CGCGGCCGTG GTCGCTCAGC CGGACGACAA ATGGGGCGAG ACGCCTTGTG CGTTCATCGA ACTGAAACCG GATGCCTCCC CCATCACCGA GCAGGACGTC ATCCTGTTCT GCCGCGAGCG ACTGGCGCAT TTCAAATGCC CGCGTCGTGT GATTTTCGGC GAGTTGCCCA AGACCGCCAC GGGCAAGATC CAGAAGTTCC GCCTTCGGGA GCAAGCGGGC AGCCAGGCCG CGATCACGAG GTTGGCGGGA TAG
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Protein sequence | MSATAYSRGL EKNAANHVPL TPLTFLDRTA DVFPNRTAII HGDFRQTWAK TRERCYRFAS ALVRLGIEPG DTVSIIAPNT PAMLEAHFGV PLSGAVLNAI NCRLDADGIA FILRHGECKL LLVDRELAPL VAKALQSVPH PPRVIDINDH EAPDGPAIGE TDYESLLASG DPEFAGRRPA DEWTPIALNY TSGTTGDPKG VVPSHRSTYV MSLLQMTNWP LPRAPIYLWT LPMFHANGWC FTWAITSAAG THVCLRKVNA ANILSAIAKH GVDHFCAAPI VLAGIASVPP SELQPLPRRV RVLTAGSPAP AAVLEAVGAV GFDVDHVYGI TEIAGTPISC AWHDEWDTLP SDQQGKMKAR QGVRAAAFEN MSVADLATLE PVPADSTSCG EVLVRGNTVM MGYFKNADAT AKAFAGGWFH TGDLAVVHPD GYIQITDRSK DVIISGGENI SSVEVEEVIY RMAGVLNAAV VAQPDDKWGE TPCAFIELKP DASPITEQDV ILFCRERLAH FKCPRRVIFG ELPKTATGKI QKFRLREQAG SQAAITRLAG
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