Gene Bamb_6016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6016 
Symbol 
ID4314920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp568593 
End bp569072 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content71% 
IMG OID638153860 
ProductMarR family transcriptional regulator 
Protein accessionYP_777894 
Protein GI115360757 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC TGCACGATCT ACGCCTCGCC GTCAGCAGCC TGCTGGTGCT CACCGCGCGC 
AAGTGGCGCC GCACGAGCGA CGCCGTGCTG ACCGCGTACA ACGTGTCCGA AGCCTGCGCG
ACGCCGCTGC TGATCGCGGG CCGTCTCGGC GAAGGCGTGC GCCAGGGCAC GCTCGCCGAG
CACGTCGGCA TCGAAGGGCC GTCGCTCGTG CGCCTGCTCG ATCAGCTGTG CGCGGCCGGC
CTCGCGCGCC GCGACGAGGA TCCGCACGAC CGCCGCGCGA AGACGATTTC GCTGACGGCC
GCCGGCCGCG CGGTCACCGC GAAGATGGAA GAAGACCTTC GCGTGCTGCG CGCGCAGGTG
CTCAAGGGCG TCACGCGCGC CGATCTCGAA GCGACGCTGC GCGTCCTGAA CGCATTCGGC
GCGGCCGATG CGCAGCACCC GGCGTCACGT CCGTCCCATC CCGCCGATTC CGCGTCATGA
 
Protein sequence
MTNLHDLRLA VSSLLVLTAR KWRRTSDAVL TAYNVSEACA TPLLIAGRLG EGVRQGTLAE 
HVGIEGPSLV RLLDQLCAAG LARRDEDPHD RRAKTISLTA AGRAVTAKME EDLRVLRAQV
LKGVTRADLE ATLRVLNAFG AADAQHPASR PSHPADSAS